RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 HOXA9P31269 272 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 CCT6AP40227 531 aaKnown RBP5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 NAMPTP43490 491 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 ARPP19P56211 112 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 ANAPC15P60006 121 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 OSTNP61366 133 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 PPP2R5AQ15172 486 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 PTPAQ15257 358 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 SAFBQ15424 915 aaKnown RBP eCLIP5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 SLC5A9Q2M3M2 681 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 DCAF4L1Q3SXM0 396 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 PABPC1LQ4VXU2 614 aaKnown RBP5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 SLC44A4Q53GD3 710 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 ATF7IP2Q5U623 682 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 ARMC6Q6NXE6 501 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 PDXDC1Q6P996 788 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 CD300LGQ6UXG3 332 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 TPRG1Q6ZUI0 275 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 MTSS1LQ765P7 747 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 MRGPREQ86SM8 312 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 MAML2Q8IZL2 1156 aaPredicted RBP5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 ERMNQ8TAM6 284 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 MYEOVQ96EZ4 313 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 MCRS1Q96EZ8 462 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 IFT74Q96LB3 600 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 PPP1R10Q96QC0 940 aaKnown RBP5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 POLR3CQ9BUI4 534 aaPredicted RBP5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 PLA2G2FQ9BZM2 168 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 BHMT2Q9H2M3 363 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 MKS1Q9NXB0 559 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 MTRRQ9UBK8 725 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 PCDHGA2Q9Y5H1 932 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 SPTBN4Q9H254 2564 aa5.63□□□□□ -1.51
RNU4-4P-201ENST00000364588 PDCD11Q14690 1871 aaKnown RBP5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 TICRRQ7Z2Z1 1910 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 MYH11P35749 1972 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 SMIM28A0A1B0GU29 152 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 CCDC169A6NNP5 214 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 AHRRA9YTQ3 701 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 TMEM189-UBE2V1I3L0A0 370 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 K7ERI5 159 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 LEFTY2O00292 366 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 PRRG1O14668 218 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 KINO60870 393 aaKnown RBP5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 RHOP08100 348 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 HARSP12081 509 aaKnown RBP5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 CEBPBP17676 345 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 CDK11BP21127 795 aaKnown RBP5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 NR4A1P22736 598 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 ELF1P32519 619 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 EFNA5P52803 228 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 SLC16A1P53985 500 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 PEX3P56589 373 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 RNASE9P60153 205 aaKnown RBP5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 KRT85P78386 507 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 ROR1Q01973 937 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 CSTF1Q05048 431 aaKnown RBP5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 UPP1Q16831 310 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 AFMIDQ63HM1 303 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 HAUS3Q68CZ6 603 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 TANGO2Q6ICL3 276 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 TSSK4Q6SA08 328 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 DGLUCYQ7Z3D6 616 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 MRGPRGQ86SM5 289 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 LDLRAD3Q86YD5 345 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 CCDC83Q8IWF9 413 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 ULK2Q8IYT8 1036 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 SUMF1Q8NBK3 374 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 RUBCNQ92622 972 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 TCEAL4Q96EI5 215 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 C8orf76Q96K31 380 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 ZMAT2Q96NC0 199 aaKnown RBP5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 C7orf25Q9BPX7 421 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 DDX23Q9BUQ8 820 aaKnown RBP5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 CDT1Q9H211 546 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 SLITRK6Q9H5Y7 841 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 LTB4R2Q9NPC1 389 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 HEBP1Q9NRV9 189 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 DDX19AQ9NUU7 478 aaKnown RBP5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 DNM3Q9UQ16 869 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 MRFAP1Q9Y605 127 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 HS3ST4Q9Y661 456 aa5.62□□□□□ -1.51
RNU4-4P-201ENST00000364588 WDR27A2RRH5 827 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 PP2D1A8MPX8 630 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 E9PMD0 336 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 PODXLO00592 558 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 TRAPPC3O43617 180 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 ECI2O75521 394 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 SEC24AO95486 1093 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 POU2F2P09086 479 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 GJA1P17302 382 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 PTPN2P17706 415 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 CDC25AP30304 524 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 ALDH1A3P47895 512 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 NPTX2P47972 431 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 GUCY2FP51841 1108 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 RAP2BP61225 183 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 INAVAQ3KP66 663 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 PHLPP2Q6ZVD8 1323 aa5.61□□□□□ -1.51
RNU4-4P-201ENST00000364588 SYT12Q8IV01 421 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms