RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 ZFP42Q96MM3 310 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 SPON1Q9HCB6 807 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 ZDHHC7Q9NXF8 308 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 CSADQ9Y600 493 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 SPEGQ15772 3267 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 KCNU1A8MYU2 1149 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 KPNA7A9QM74 516 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 ZFXP17010 805 aaPredicted RBP10.76□□□□□ -0.69
SMC3-201ENST00000361804 USP10Q14694 798 aaKnown RBP10.76□□□□□ -0.69
SMC3-201ENST00000361804 GRIK4Q16099 956 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 SLC25A52Q3SY17 297 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 ARRDC4Q8NCT1 418 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 NXNL1Q96CM4 212 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 SNX27Q96L92 541 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 TRIM8Q9BZR9 551 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 SNX25Q9H3E2 840 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 DMAP1Q9NPF5 467 aaPredicted RBP10.76□□□□□ -0.69
SMC3-201ENST00000361804 XPR1Q9UBH6 696 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 DNAJB4Q9UDY4 337 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 KIAA1257Q9ULG3 409 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 TBC1D30Q9Y2I9 924 aa10.76□□□□□ -0.69
SMC3-201ENST00000361804 CCL22O00626 93 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 RNASEH2AO75792 299 aaKnown RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 USP17L7P0C7H9 530 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 SPRP35270 261 aaPredicted RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 LAMC2Q13753 1193 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 ZNF423Q2M1K9 1284 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 FBXO47Q5MNV8 452 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 OGFRL1Q5TC84 451 aaPredicted RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 PAQR9Q6ZVX9 377 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 FSTL5Q8N475 847 aaPredicted RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 EZH1Q92800 747 aaPredicted RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 SORCS3Q9UPU3 1222 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 GNEQ9Y223 722 aaKnown RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 CDY2AQ9Y6F7 541 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 CDY1Q9Y6F8 540 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 MATN2O00339 956 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 HNRNPRO43390 633 aaKnown RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 SRGAP2BP0DMP2 458 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 DESP17661 470 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 NME5P56597 212 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 CDK18Q07002 472 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 MYLK3Q32MK0 819 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 GRTP1Q5TC63 336 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 OLFML2BQ68BL8 750 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 ANKRD13AQ8IZ07 590 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 RTKNQ9BST9 563 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 ULBP1Q9BZM6 244 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 ILKAPQ9H0C8 392 aaPredicted RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 LRRC40Q9H9A6 602 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 OXSMQ9NWU1 459 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 ADA2Q9NZK5 511 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 VWA8A3KMH1 1905 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 GREB1Q4ZG55 1949 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 ATP6AP2A0A1C7CYW4 349 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 DCLK1O15075 740 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 ATP6AP2O75787 350 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 AHSGP02765 367 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 PABPC4LP0CB38 370 aaKnown RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 MLNP12872 115 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 KCNA5P22460 613 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 GARSP41250 739 aaKnown RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 GRM5P41594 1212 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 LSAMPQ13449 338 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 DPYSQ14117 519 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 IL23RQ5VWK5 629 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 WSCD1Q658N2 575 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 SEL1L3Q68CR1 1132 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 BNC2Q6ZN30 1099 aaPredicted RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 ADGRG6Q86SQ4 1221 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 CLEC14AQ86T13 490 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 CENPLQ8N0S6 344 aaPredicted RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 KYQ8NBH2 561 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 OR9I1Q8NGQ6 314 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 SH3RF2Q8TEC5 729 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 APBB2Q92870 758 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 TMIGD2Q96BF3 282 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 LRGUKQ96M69 825 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 FERMT1Q9BQL6 677 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 MED10Q9BTT4 135 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 WDR41Q9HAD4 459 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 BFARQ9NZS9 450 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 COPG1Q9Y678 874 aaKnown RBP10.75□□□□□ -0.69
SMC3-201ENST00000361804 TTC3P53804 2025 aa10.75□□□□□ -0.69
SMC3-201ENST00000361804 SMIM28A0A1B0GU29 152 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 ANKRD33BA6NCL7 494 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 DLX3O60479 287 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 PGK1P00558 417 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 SLC35E2BP0CK96 405 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 HOXC8P31273 242 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 CHRNA4P43681 627 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 TKTL1P51854 596 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 CYLC2Q14093 348 aaPredicted RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 GRM2Q14416 872 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 ZNF789Q5FWF6 425 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 KLHDC10Q6PID8 442 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 PSTKQ8IV42 348 aaKnown RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 ZFP28Q8NHY6 868 aa10.74□□□□□ -0.69
SMC3-201ENST00000361804 RPL10LQ96L21 214 aaKnown RBP10.74□□□□□ -0.69
SMC3-201ENST00000361804 STK39Q9UEW8 545 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms