RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 ATP6V1B2P21281 511 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 LMO2P25791 158 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 GRIK1P39086 918 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 KCNK10P57789 538 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 LSM3P62310 102 aaKnown RBP13.86□□□□□ -0.19
SGMS1-202ENST00000361781 FKBP1AP62942 108 aaKnown RBP13.86□□□□□ -0.19
SGMS1-202ENST00000361781 SLC10A6Q3KNW5 377 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 LIPMQ5VYY2 423 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 ANGPTL8Q6UXH0 198 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 PNPLA1Q8N8W4 532 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 CCDC106Q9BWC9 280 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 STK39Q9UEW8 545 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 OR12D3Q9UGF7 316 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 UBQLN1Q9UMX0 589 aaKnown RBP13.86□□□□□ -0.19
SGMS1-202ENST00000361781 TSC22D4Q9Y3Q8 395 aa13.86□□□□□ -0.19
SGMS1-202ENST00000361781 MAFBQ9Y5Q3 323 aaPredicted RBP13.86□□□□□ -0.19
SGMS1-202ENST00000361781 NFASCO94856 1347 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 E5RI56 91 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 FASP25445 335 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 ITGADQ13349 1161 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 PCLAFQ15004 111 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 SOWAHAQ2M3V2 549 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 IL23RQ5VWK5 629 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 FRA10AC1Q70Z53 315 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 TAS2R42Q7RTR8 314 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 STK32CQ86UX6 486 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 TTC30AQ86WT1 665 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 APOBEC3FQ8IUX4 373 aaKnown RBP13.85□□□□□ -0.19
SGMS1-202ENST00000361781 NAT16Q8N8M0 369 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 THUMPD3Q9BV44 507 aaKnown RBP13.85□□□□□ -0.19
SGMS1-202ENST00000361781 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.85□□□□□ -0.19
SGMS1-202ENST00000361781 SIX4Q9UIU6 781 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 SPATA31A6Q5VVP1 1343 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 PDLIM1O00151 329 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 TADA2AO75478 443 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 CLIC3O95833 236 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 FGF3P11487 239 aaPredicted RBP13.85□□□□□ -0.19
SGMS1-202ENST00000361781 AOC1P19801 751 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 NMBRP28336 390 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 PSMD7P51665 324 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 CCNG1P51959 295 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 CCNIQ14094 377 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 TLR1Q15399 786 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 PERM1Q5SV97 790 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 TREML2Q5T2D2 321 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 MBLAC2Q68D91 279 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 NOTUMQ6P988 496 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 PATL1Q86TB9 770 aaKnown RBP13.85□□□□□ -0.19
SGMS1-202ENST00000361781 SAPCD2Q86UD0 394 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 TP53INP2Q8IXH6 220 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 TMCO5AQ8N6Q1 288 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 GATA6Q92908 595 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 EGFL8Q99944 293 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 MORF4L1Q9UBU8 362 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 ITGB4P16144 1822 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 DOT1LQ8TEK3 1739 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 CASTOR2A6NHX0 329 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 E7ESA3 106 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 B3GAT3O94766 335 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 CCR1P32246 355 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 NAA20P61599 178 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 WSCD1Q658N2 575 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 CATSPERGQ6ZRH7 1159 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 FSTL5Q8N475 847 aaPredicted RBP13.85□□□□□ -0.19
SGMS1-202ENST00000361781 ACTRT2Q8TDY3 377 aa13.85□□□□□ -0.19
SGMS1-202ENST00000361781 MRPS26Q9BYN8 205 aaKnown RBP13.85□□□□□ -0.19
SGMS1-202ENST00000361781 DDX43Q9NXZ2 648 aaKnown RBP13.85□□□□□ -0.19
SGMS1-202ENST00000361781 SLCO1B7G3V0H7 640 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 TRIM38O00635 465 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 ZBTB14O43829 449 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 ATP6V1G1O75348 118 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 HSPA1AP0DMV8 641 aaKnown RBP13.84□□□□□ -0.19
SGMS1-202ENST00000361781 HSPA1BP0DMV9 641 aaKnown RBP13.84□□□□□ -0.19
SGMS1-202ENST00000361781 CRABP2P29373 138 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 GSSP48637 474 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 PCYT1AP49585 367 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 NEPROQ6NW34 567 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 MOB2Q70IA6 237 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 NXF3Q9H4D5 531 aaKnown RBP13.84□□□□□ -0.19
SGMS1-202ENST00000361781 FAM50BQ9Y247 325 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 PCDHB12Q9Y5F1 795 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 BCORQ6W2J9 1755 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 FAM159BA6NKW6 160 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 MYO1GB0I1T2 1018 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 ADCYAP1R1P41586 468 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 C21orf59P57076 290 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 LAMC2Q13753 1193 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 ZNF235Q14590 738 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 PFKFB4Q16877 469 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 SPPL2CQ8IUH8 684 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 OR9I1Q8NGQ6 314 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 BHMTQ93088 406 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 GID8Q9NWU2 228 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 ADAMTS7Q9UKP4 1686 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 ENDOD1O94919 500 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 CD4P01730 458 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 TGFB3P10600 412 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 L1CAMP32004 1257 aa13.84□□□□□ -0.19
SGMS1-202ENST00000361781 PITX1P78337 314 aaPredicted RBP13.84□□□□□ -0.19
SGMS1-202ENST00000361781 SLC10A2Q12908 348 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms