RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 MMP13P45452 471 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 GEMP55040 296 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 OXCT1P55809 520 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 SLC10A7Q0GE19 358 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 LBRQ14739 615 aaKnown RBP21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 MPPE1Q53F39 396 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 IL31Q6EBC2 164 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 ARFGAP2Q8N6H7 521 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 TTC16Q8NEE8 873 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 VN1R2Q8NFZ6 395 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 OXNAD1Q96HP4 312 aaPredicted RBP21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 CDX2Q99626 313 aaPredicted RBP21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 SLC25A51Q9H1U9 297 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 CCL26Q9Y258 94 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 MRPS23Q9Y3D9 190 aaKnown RBP21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 TTLL3Q9Y4R7 772 aa21.36■■□□□ 1.01
MAP1LC3A-201ENST00000360668 H0Y626 953 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 AP3B1O00203 1094 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 CPP00450 1065 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 GSTA2P09210 222 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 CEBPBP17676 345 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 GYS2P54840 703 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 RNF43Q68DV7 783 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 NAPEPLDQ6IQ20 393 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 C3orf62Q6ZUJ4 267 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 LINC00523Q86TU6 105 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 CARNMT1Q8N4J0 409 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 C12orf76Q8N812 135 aaPredicted RBP21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 EBNA1BP2Q99848 306 aaKnown RBP21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 SPON2Q9BUD6 331 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 ATP13A1Q9HD20 1204 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 NT5MQ9NPB1 228 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 CASS4Q9NQ75 786 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 HAUS2Q9NVX0 235 aa21.35■■□□□ 1.01
MAP1LC3A-201ENST00000360668 SDR42E2A6NKP2 422 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 WEE1P30291 646 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 SSTR1P30872 391 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 USP4Q13107 963 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 SPARCL1Q14515 664 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 RFTN1Q14699 578 aaPredicted RBP21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 GRIN2CQ14957 1233 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 RNF219Q5W0B1 726 aaPredicted RBP21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 KDM7AQ6ZMT4 941 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 EPS8L3Q8TE67 593 aaKnown RBP21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 DDI1Q8WTU0 396 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 STMN4Q9H169 189 aaPredicted RBP21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 MUC3BQ9H195 1237 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 PPCSQ9HAB8 311 aa21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 ZC3H7BQ9UGR2 993 aaKnown RBP21.34■■□□□ 1.01
MAP1LC3A-201ENST00000360668 TRANK1O15050 2925 aa21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 ZNF77Q15935 545 aa21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 TMC5Q6UXY8 1006 aa21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 CAPN12Q6ZSI9 719 aa21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 CCNJLQ8IV13 435 aa21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 BBS5Q8N3I7 341 aa21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 SPATA22Q8NHS9 363 aa21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 IMP4Q96G21 291 aaKnown RBP21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 CENPHQ9H3R5 247 aa21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 UBA2Q9UBT2 640 aaPredicted RBP21.33■■□□□ 1.01
MAP1LC3A-201ENST00000360668 TLDC2A0PJX2 215 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 RFXAPO00287 272 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 PRAMEF12O95522 483 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 CYBBP04839 570 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 SESN2P58004 480 aaPredicted RBP21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 MPP3Q13368 585 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 CDH18Q13634 790 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 LONRF1Q17RB8 773 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 TMEM184AQ6ZMB5 413 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 MPP5Q8N3R9 675 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 OR52K1Q8NGK4 314 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 ITFG1Q8TB96 612 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 ZSWIM3Q96MP5 696 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 NAT9Q9BTE0 207 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 ACSS3Q9H6R3 686 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 VPS45Q9NRW7 570 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 UBP1Q9NZI7 540 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 TBC1D14Q9P2M4 693 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 FETUBQ9UGM5 382 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 RABGEF1Q9UJ41 708 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 MAD1L1Q9Y6D9 718 aa21.32■■□□□ 1
MAP1LC3A-201ENST00000360668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 EXOC1LA0A1B0GW35 172 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 RGS16O15492 202 aaPredicted RBP21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 MT-CYBP00156 380 aaPredicted RBP21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 MGAT1P26572 445 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 NPY2RP49146 381 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 ZNF235Q14590 738 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 FSCBQ5H9T9 825 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 ARID3BQ8IVW6 561 aaPredicted RBP21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 MFN1Q8IWA4 741 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 CCDC117Q8IWD4 279 aaPredicted RBP21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 RIBC1Q8N443 379 aaPredicted RBP21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 KIAA1958Q8N8K9 716 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 RIN3Q8TB24 985 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 FBF1Q8TES7 1133 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 ING5Q8WYH8 240 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 TLCD1Q96CP7 247 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 STAMBPL1Q96FJ0 436 aa21.31■■□□□ 1
MAP1LC3A-201ENST00000360668 CFAP36Q96G28 342 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms