RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 RAB3IPQ96QF0 476 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 AGAP2Q99490 1192 aa18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 SIKE1Q9BRV8 207 aa18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 TTLL2Q9BWV7 592 aa18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 KCNK13Q9HB14 408 aa18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 PAK6Q9NQU5 681 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 IARS2Q9NSE4 1012 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 THAP1Q9NVV9 213 aa18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 EMCNQ9ULC0 261 aa18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 HBS1LQ9Y450 684 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-203ENST00000359895 PQBP1O60828 265 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 PROCP04070 461 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 PAMP19021 973 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 TNK2Q07912 1038 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 DUSP4Q13115 394 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 RIPK1Q13546 671 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 RAP1GAP2Q684P5 730 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 DENND5AQ6IQ26 1287 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 FBXL22Q6P050 247 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 MIB1Q86YT6 1006 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 HMCESQ96FZ2 354 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 MCMBPQ9BTE3 642 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 PRKD2Q9BZL6 878 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 LRMDAQ9H2I8 198 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 CRISPLD1Q9H336 500 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 RETREG1Q9H6L5 497 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 SP110Q9HB58 689 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 VPS45Q9NRW7 570 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 HEY2Q9UBP5 337 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 TCAF1Q9Y4C2 921 aa18.58■□□□□ 0.56
PDLIM7-203ENST00000359895 CCDC195A0A1B0GUA6 201 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 NT5C1B-RDH14C9J2C7 533 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 TBX18O95935 607 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 PEX11BO96011 259 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 GRK2P25098 689 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 POLD2P49005 469 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 MAPKAPK2P49137 400 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 TUFMP49411 452 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 YBEYP58557 167 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 ZBTB16Q05516 673 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 USP41Q3LFD5 358 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 PARP15Q460N3 678 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 TAF1BQ53T94 588 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 MARC1Q5VT66 337 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 C16orf46Q6P387 395 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 RANBP10Q6VN20 620 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 TFAP2DQ7Z6R9 452 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 CLNKQ7Z7G1 428 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 MTDHQ86UE4 582 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 LCA5Q86VQ0 697 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 CNTN4Q8IWV2 1026 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 PDZD8Q8NEN9 1154 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 FBXO22Q8NEZ5 403 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 OVCA2Q8WZ82 227 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 ZNF419Q96HQ0 510 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 VPS39Q96JC1 886 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 MRGPRX2Q96LB1 330 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 HIPK3Q9H422 1215 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 ARNT2Q9HBZ2 717 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 HCSTQ9UBK5 93 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 MTRRQ9UBK8 725 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 MAGED2Q9UNF1 606 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 ANKRD6Q9Y2G4 727 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 BACE2Q9Y5Z0 518 aa18.57■□□□□ 0.56
PDLIM7-203ENST00000359895 CHD5Q8TDI0 1954 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 TLR5O60602 858 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 PMPCBO75439 489 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 HAUS5O94927 633 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 MYL2P10916 166 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 ALDH7A1P49419 539 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 KCNJ2P63252 427 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 IL10RBQ08334 325 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 PCLAFQ15004 111 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 SNCBQ16143 134 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 ALFQ53S48 1182 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 MBLAC2Q68D91 279 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 SLC8B1Q6J4K2 584 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 KDELC1Q6UW63 502 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 TEX26Q8N6G2 289 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 SKA1Q96BD8 255 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 IMP4Q96G21 291 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 SCLYQ96I15 445 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 TMEM237Q96Q45 408 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 GPR22Q99680 433 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 WWP1Q9H0M0 922 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 RHOJQ9H4E5 214 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 MID2Q9UJV3 735 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 OGDHLQ9ULD0 1010 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 CDY1Q9Y6F8 540 aa18.56■□□□□ 0.56
PDLIM7-203ENST00000359895 CNTN5O94779 1100 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 TOP3BO95985 862 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 GSRP00390 522 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 SERPINE1P05121 402 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 APOA4P06727 396 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 HMBSP08397 361 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 DNAJB1P25685 340 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 WNT3AP56704 352 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 POU6F1Q14863 301 aa18.55■□□□□ 0.56
PDLIM7-203ENST00000359895 SMAD1Q15797 465 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms