RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ALADP13716 330 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 SYN1P17600 705 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 MX2P20592 715 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 FDFT1P37268 417 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 WDR4P57081 412 aaKnown RBP12.87□□□□□ -0.35
GGPS1-202ENST00000358966 TWF1Q12792 350 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 APLFQ8IW19 511 aaPredicted RBP12.87□□□□□ -0.35
GGPS1-202ENST00000358966 LRRC34Q8IZ02 419 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 MCUQ8NE86 351 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 MZB1Q8WU39 189 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 PABPC5Q96DU9 382 aaKnown RBP12.87□□□□□ -0.35
GGPS1-202ENST00000358966 ATXN7L3BQ96GX2 97 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 CYTH2Q99418 400 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 BRD8Q9H0E9 1235 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 CNOT10Q9H9A5 744 aaKnown RBP12.87□□□□□ -0.35
GGPS1-202ENST00000358966 ABHD14A-ACY1A0A1B0GW23 586 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 WDR91A4D1P6 747 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 PRRG1O14668 218 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
GGPS1-202ENST00000358966 ACVRL1P37023 503 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 ETFBP38117 255 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 PGGT1BP53609 377 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 RPS24P62847 133 aaKnown RBP12.87□□□□□ -0.35
GGPS1-202ENST00000358966 RPL10AP62906 217 aaKnown RBP12.87□□□□□ -0.35
GGPS1-202ENST00000358966 CBX3Q13185 183 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 SLC1A5Q15758 541 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 DENND1CQ8IV53 801 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 PNPLA1Q8N8W4 532 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 SMYD1Q8NB12 490 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 IPMKQ8NFU5 416 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 PSMG2Q969U7 264 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 SPATA17Q96L03 361 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 TEKT5Q96M29 485 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 GBA3Q9H227 469 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 CATSPERBQ9H7T0 1116 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 IGSF9Q9P2J2 1179 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 WDR37Q9Y2I8 494 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 KIAA1671Q9BY89 1806 aa12.87□□□□□ -0.35
GGPS1-202ENST00000358966 MYLKQ15746 1914 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF840PA6NDX5 716 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 NDC80O14777 642 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 TEX28O15482 410 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 PFDN1O60925 122 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 PMPCBO75439 489 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 KLKB1P03952 638 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 INHBAP08476 426 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 ERVK-10P10266 1014 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 CA4P22748 312 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 HOXC13P31276 330 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 CHRNA4P43681 627 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 LBRQ14739 615 aaKnown RBP12.86□□□□□ -0.35
GGPS1-202ENST00000358966 TRIP4Q15650 581 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-202ENST00000358966 PCSK7Q16549 785 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 TMEM154Q6P9G4 183 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 C16orf87Q6PH81 154 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 ADGRD1Q6QNK2 874 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 NECAB2Q7Z6G3 386 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 CROCCP2Q86T23 111 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 MFSD3Q96ES6 412 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 FCRL3Q96P31 734 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-202ENST00000358966 DHRS4Q9BTZ2 278 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 CLIC5Q9NZA1 410 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 IPO11Q9UI26 975 aaKnown RBP12.86□□□□□ -0.35
GGPS1-202ENST00000358966 A0A0D9SEW6 157 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 SMAPO00193 183 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 PARNO95453 639 aaKnown RBP12.86□□□□□ -0.35
GGPS1-202ENST00000358966 PENKP01210 267 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-202ENST00000358966 URODP06132 367 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 ZDHHC11BP0C7U3 371 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 GJA1P17302 382 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 SP100P23497 879 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-202ENST00000358966 DSG1Q02413 1049 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 SLC10A7Q0GE19 358 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 IHHQ14623 411 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 TAF12Q16514 161 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 KLHL38Q2WGJ6 581 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 MROH9Q5TGP6 573 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 SLC44A1Q8WWI5 657 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 BADQ92934 168 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 AZIN2Q96A70 460 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 ZNF317Q96PQ6 595 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-202ENST00000358966 FERMT1Q9BQL6 677 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 XAB2Q9HCS7 855 aaKnown RBP12.86□□□□□ -0.35
GGPS1-202ENST00000358966 TRPC7Q9HCX4 862 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 SLC17A7Q9P2U7 560 aa12.86□□□□□ -0.35
GGPS1-202ENST00000358966 ANAPC1Q9H1A4 1944 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 TCP11X1B4DZS4 312 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 TSPAN3O60637 253 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 AP2A1O95782 977 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 ATP5DP30049 168 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 ZXDBP98169 803 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 GKAP1Q5VSY0 366 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-202ENST00000358966 LRRC8BQ6P9F7 803 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 FAM47EQ6ZV65 393 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-202ENST00000358966 TDRPQ86YL5 185 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 LMNTD2Q8IXW0 634 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 LGI2Q8N0V4 545 aa12.85□□□□□ -0.35
GGPS1-202ENST00000358966 ARHGAP18Q8N392 663 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms