RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 TPP2P29144 1249 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 NT5C2P49902 561 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 ADGRG6Q86SQ4 1221 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 OR10H5Q8NGA6 315 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 SLC38A2Q96QD8 506 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 LMAN2LQ9H0V9 348 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 FFAR2O15552 330 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 USP12O75317 370 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 MICAL2O94851 1124 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 STAT5AP42229 794 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 BPIFB6Q8NFQ5 453 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 BRINP2Q9C0B6 783 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 CLIC5Q9NZA1 410 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 A0A1W2PQC6 194 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 ANXA6P08133 673 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 ZNF484Q5JVG2 852 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 PPP1R15BQ5SWA1 713 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 PLPP4Q5VZY2 271 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 CHST4Q8NCG5 386 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 RP9Q8TA86 221 aaKnown RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 EMID1Q96A84 441 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 C5orf34Q96MH7 638 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 FAM126AQ9BYI3 521 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 IGSF1Q8N6C5 1336 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 NPHP4O75161 1426 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 URADA6NGE7 173 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 TBL1XO60907 577 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 FCGR1AP12314 374 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 SERPINA4P29622 427 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 MYL6P60660 151 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 SP140Q13342 867 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 GPR135Q8IZ08 494 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 OR56A4Q8NGH8 313 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 UGT2B28Q9BY64 529 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 TKTL2Q9H0I9 626 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 TPRKBQ9Y3C4 175 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 GAS2O43903 313 aaKnown RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 ZNF615Q8N8J6 731 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 TPCN2Q8NHX9 752 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 PHF10Q8WUB8 498 aaKnown RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 NECTIN3Q9NQS3 549 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 SLC27A6Q9Y2P4 619 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 DNAJC13O75165 2243 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 KIAA0556O60303 1618 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 SMCO3A2RU48 225 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 PER1O15534 1290 aaPredicted RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 MYL9P24844 172 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 PTPN20Q4JDL3 420 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 SMARCD1Q96GM5 515 aa17.45■□□□□ 0.38
COL27A1-201ENST00000356083 ADARB2Q9NS39 739 aaKnown RBP17.45■□□□□ 0.38
COL27A1-201ENST00000356083 MAGEA13PA6NCF6 341 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 WASP42768 502 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 BEX3Q00994 111 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 IQSEC1Q6DN90 963 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 ZNF613Q6PF04 617 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 ITCHQ96J02 903 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 GAL3ST1Q99999 423 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 C7orf25Q9BPX7 421 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 IMP3Q9NV31 184 aaKnown RBP17.44■□□□□ 0.38
COL27A1-201ENST00000356083 FOXN3O00409 490 aaPredicted RBP17.44■□□□□ 0.38
COL27A1-201ENST00000356083 NAMPTP43490 491 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 NDST1P52848 882 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 HYIQ5T013 277 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 MAP1SQ66K74 1059 aaPredicted RBP17.44■□□□□ 0.38
COL27A1-201ENST00000356083 TMEM237Q96Q45 408 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 SEMA4BQ9NPR2 832 aaPredicted RBP17.44■□□□□ 0.38
COL27A1-201ENST00000356083 GRIK4Q16099 956 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 ATG14Q6ZNE5 492 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 AGPAT3Q9NRZ7 376 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 OSER1Q9NX31 292 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 PZPP20742 1482 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 CCDC182A6NF36 153 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 POU5F2Q8N7G0 328 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 RABGEF1Q9UJ41 708 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 PLEKHG2Q9H7P9 1386 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 USP46P62068 366 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 ACSM2AQ08AH3 577 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 ACSM2BQ68CK6 577 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 MZT2AQ6P582 158 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 SCIMPQ6UWF3 145 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 ADCY4Q8NFM4 1077 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 NDRG2Q9UN36 371 aaKnown RBP17.44■□□□□ 0.38
COL27A1-201ENST00000356083 LDLRP01130 860 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 FMR1Q06787 632 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL27A1-201ENST00000356083 BPIFA3Q9BQP9 254 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 ASAH2Q9NR71 780 aa17.44■□□□□ 0.38
COL27A1-201ENST00000356083 GJA1P17302 382 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 AMPD1P23109 780 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 RIN1Q13671 783 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 HIPK1Q86Z02 1210 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 PHF20Q9BVI0 1012 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 TCF7L2Q9NQB0 619 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 HYKKA2RU49 373 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 NOS2P35228 1153 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 SNRPD1P62314 119 aaKnown RBP17.43■□□□□ 0.38
COL27A1-201ENST00000356083 CHAF1BQ13112 559 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 SWI5Q1ZZU3 235 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 XKR6Q5GH73 641 aa17.43■□□□□ 0.38
COL27A1-201ENST00000356083 COLEC12Q5KU26 742 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms