RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PSMA3P25788 255 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 ETFBP38117 255 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 ETV4P43268 484 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 SESN2P58004 480 aaPredicted RBP17.5■□□□□ 0.39
VPS13B-201ENST00000355155 GNA12Q03113 381 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 SPARCL1Q14515 664 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 DBN1Q16643 649 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
VPS13B-201ENST00000355155 SPOCK2Q92563 424 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 MGME1Q9BQP7 344 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 SP110Q9HB58 689 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 HAUS2Q9NVX0 235 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 NSMCE4AQ9NXX6 385 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 CXXC1Q9P0U4 656 aaPredicted RBP17.5■□□□□ 0.39
VPS13B-201ENST00000355155 SAMD15Q9P1V8 674 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 PRKAG2Q9UGJ0 569 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 ZFP37Q9Y6Q3 630 aaPredicted RBP17.5■□□□□ 0.39
VPS13B-201ENST00000355155 PAPSS2O95340 614 aaPredicted RBP17.49■□□□□ 0.39
VPS13B-201ENST00000355155 IL1BP01584 269 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 RB1P06400 928 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 HMBSP08397 361 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 CES1P23141 567 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 DDX6P26196 483 aaKnown RBP eCLIP17.49■□□□□ 0.39
VPS13B-201ENST00000355155 OR1E1P30953 314 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 SEC24CP53992 1094 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 GRTP1Q5TC63 336 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 PKN3Q6P5Z2 889 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 HTR3DQ70Z44 454 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 PPM1NQ8N819 430 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 MRPL43Q8N983 215 aaKnown RBP17.49■□□□□ 0.39
VPS13B-201ENST00000355155 AUTS2Q8WXX7 1259 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 PEX13Q92968 403 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 SERAC1Q96JX3 654 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 C2orf71A6NGG8 1288 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 FOXO6A8MYZ6 492 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 CXCL14O95715 111 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 MT-ND3P03897 115 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 TCF3P15923 654 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 KRT4P19013 534 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 CDC25CP30307 473 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 CSE1LP55060 971 aaKnown RBP17.49■□□□□ 0.39
VPS13B-201ENST00000355155 IL9RQ01113 521 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 ILF2Q12905 390 aaKnown RBP17.49■□□□□ 0.39
VPS13B-201ENST00000355155 LBRQ14739 615 aaKnown RBP17.49■□□□□ 0.39
VPS13B-201ENST00000355155 SKIDA1Q1XH10 827 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 PACS1Q6VY07 963 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 TFAP2DQ7Z6R9 452 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 GALNT7Q86SF2 657 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 NSMCE1Q8WV22 266 aa17.49■□□□□ 0.39
VPS13B-201ENST00000355155 PPANQ9NQ55 473 aaKnown RBP17.49■□□□□ 0.39
VPS13B-201ENST00000355155 NDUFAB1O14561 156 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 EN2P19622 333 aaPredicted RBP17.48■□□□□ 0.39
VPS13B-201ENST00000355155 MTM1Q13496 603 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 PDK4Q16654 411 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 MPP7Q5T2T1 576 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 PGBD5Q8N414 524 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 SPPL3Q8TCT6 385 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 PRKD2Q9BZL6 878 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 VPS11Q9H270 941 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 KIF9Q9HAQ2 790 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 KCNK9Q9NPC2 374 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 TREX1Q9NSU2 369 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 DNMT3BQ9UBC3 853 aaKnown RBP17.48■□□□□ 0.39
VPS13B-201ENST00000355155 POLD2P49005 469 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 SLC10A7Q0GE19 358 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 PDE12Q6L8Q7 609 aaKnown RBP17.48■□□□□ 0.39
VPS13B-201ENST00000355155 C6orf89Q6UWU4 347 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 DENND1CQ8IV53 801 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 KIAA1958Q8N8K9 716 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 SPATA22Q8NHS9 363 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 TCAF1Q9Y4C2 921 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 RPS6KL1Q9Y6S9 549 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 DNAJB1P25685 340 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 GP5P40197 560 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 CLCN4P51793 760 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 TAF12Q16514 161 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 TEDDM1Q5T9Z0 273 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 CXorf57Q6NSI4 855 aaKnown RBP17.48■□□□□ 0.39
VPS13B-201ENST00000355155 GAREM2Q75VX8 874 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 USP33Q8TEY7 942 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 WBP2Q969T9 261 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 MCOLN1Q9GZU1 580 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 SLC4A7Q9Y6M7 1214 aa17.48■□□□□ 0.39
VPS13B-201ENST00000355155 CEP350Q5VT06 3117 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 CR2P20023 1033 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 ADRA1DP25100 572 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 RPA3P35244 121 aaPredicted RBP17.47■□□□□ 0.39
VPS13B-201ENST00000355155 ACVRL1P37023 503 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 CERCAMQ5T4B2 595 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 KREMEN2Q8NCW0 462 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 FEM1CQ96JP0 617 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 SAMD11Q96NU1 681 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 PSKH2Q96QS6 385 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 TRIM56Q9BRZ2 755 aaKnown RBP17.47■□□□□ 0.39
VPS13B-201ENST00000355155 NACA2Q9H009 215 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 OR51B4Q9Y5P0 310 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 ZBBXA8MT70 800 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 TRIM49D1C9J1S8 452 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 TAC1P20366 129 aa17.47■□□□□ 0.39
VPS13B-201ENST00000355155 GBP2P32456 591 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms