RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ADAM8P78325 824 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 KLHL22Q53GT1 634 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 KBTBD2Q8IY47 623 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 LRRC34Q8IZ02 419 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 NATD1Q8N6N6 113 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 CNTD1Q8N815 330 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 LRRC20Q8TCA0 184 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 SPIRE2Q8WWL2 714 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 EEF2KMTQ96G04 330 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 DPP7Q9UHL4 492 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 ABCG2Q9UNQ0 655 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 CYP11B1P15538 503 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 MCAMP43121 646 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 TRIM28Q13263 835 aaKnown RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 SMCO3A2RU48 225 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 PDHBP11177 359 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 CIAPIN1Q6FI81 312 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 STAG3L4Q8TBR4 150 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 TNFAIP8L1Q8WVP5 186 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 F8W031 263 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 SLC30A4O14863 429 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 SUPT7LO94864 414 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 TRIM32Q13049 653 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 LSM12Q3MHD2 195 aaKnown RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 C7orf31Q8N865 590 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 C9orf43Q8TAL5 461 aaPredicted RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 MIPEPQ99797 713 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 MGME1Q9BQP7 344 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 TRNAU1APQ9NX07 287 aaKnown RBP8.12□□□□□ -1.11
HTT-201ENST00000355072 ANGPT4Q9Y264 503 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 KCNIP3Q9Y2W7 256 aa8.12□□□□□ -1.11
HTT-201ENST00000355072 SHPRHQ149N8 1683 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 COL15A1P39059 1388 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CYP3A7-CYP3A51PA0A087WV96 503 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 TSC22D2O75157 780 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ITGALP20701 1170 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 COMTP21964 271 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CYP3A7P24462 503 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 FOLH1Q04609 750 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CUL2Q13617 745 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 DCUN1D5Q9BTE7 237 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 PSME2Q9UL46 239 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ZNF232Q9UNY5 417 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 RBAK-RBAKDNI3L0D1 243 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 MAP3K6O95382 1288 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 EGFRP00533 1210 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 PRG2P13727 222 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 RABL3Q5HYI8 236 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 BRMS1LQ5PSV4 323 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ACAD10Q6JQN1 1059 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 WDR49Q8IV35 697 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 POLR3FQ9H1D9 316 aaPredicted RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 POLR1BQ9H9Y6 1135 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 SNX6Q9UNH7 406 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 PLA2G6O60733 806 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CHRNGP07510 517 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 EPCAMP16422 314 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 PTPN3P26045 913 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 POU1F1P28069 291 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 SLC16A1P53985 500 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ABRQ12979 859 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 TBRG1Q3YBR2 411 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ZNF572Q7Z3I7 529 aaPredicted RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 KNDC1Q76NI1 1749 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 RNASEH1O60930 286 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 TWF1Q12792 350 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ZNF438Q7Z4V0 828 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 EPS8L3Q8TE67 593 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 GIPC3Q8TF64 312 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ZNF670Q9BS34 389 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 UNKQ9C0B0 810 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 SARS2Q9NP81 518 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 DCP1AQ9NPI6 582 aaPredicted RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 DBR1Q9UK59 544 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 TPD52L2O43399 206 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 DNAJB6O75190 326 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ABL1P00519 1130 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ASLP04424 464 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ATP12AP54707 1039 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CAMK2GQ13555 558 aaPredicted RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 SLC27A3Q5K4L6 730 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 FBXO39Q8N4B4 442 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 BHLHE22Q8NFJ8 381 aaPredicted RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 SAV1Q9H4B6 383 aaPredicted RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 SFMBT1Q9UHJ3 866 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 MRTO4Q9UKD2 239 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 KDM6BO15054 1643 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 GRIN2DO15399 1336 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 ZC3H4Q9UPT8 1303 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 PPEF2O14830 753 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 SLC28A2O43868 658 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CALCAP01258 141 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 SNRPB2P08579 225 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 GSTT2P0CG29 244 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 EPHB2P29323 1055 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 CBX3Q13185 183 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 KIZQ2M2Z5 673 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 PSTKQ8IV42 348 aaKnown RBP8.11□□□□□ -1.11
HTT-201ENST00000355072 OR6B3Q8NGW1 331 aa8.11□□□□□ -1.11
HTT-201ENST00000355072 STRBPQ96SI9 672 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms