RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PRR23CQ6ZRP0 262 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 SH2D5Q6ZV89 423 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 ERO1BQ86YB8 467 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 ANKRD13AQ8IZ07 590 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 DEPDC4Q8N2C3 294 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 CLIP4Q8N3C7 705 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 GTF3C2Q8WUA4 911 aaPredicted RBP9.54□□□□□ -0.88
SMG6-202ENST00000354901 BORCS5Q969J3 196 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 TRPV6Q9H1D0 765 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 EPB41L1Q9H4G0 881 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 ASB7Q9H672 318 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 NOL6Q9H6R4 1146 aaKnown RBP9.54□□□□□ -0.88
SMG6-202ENST00000354901 ATP11BQ9Y2G3 1177 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 NME7Q9Y5B8 376 aa9.54□□□□□ -0.88
SMG6-202ENST00000354901 CCDC78A2IDD5 438 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 SIN3BO75182 1162 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 USP12O75317 370 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ENDOD1O94919 500 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ESRRBO95718 433 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ENO2P09104 434 aaPredicted RBP9.53□□□□□ -0.88
SMG6-202ENST00000354901 ENO3P13929 434 aaPredicted RBP9.53□□□□□ -0.88
SMG6-202ENST00000354901 CD247P20963 164 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 PPP2R5DQ14738 602 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 SOWAHAQ2M3V2 549 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ZNF618Q5T7W0 954 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 GALNT18Q6P9A2 607 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ARMCX2Q7L311 632 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 CHSY1Q86X52 802 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 SLC43A3Q8NBI5 491 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 PPWD1Q96BP3 646 aaKnown RBP9.53□□□□□ -0.88
SMG6-202ENST00000354901 SNX25Q9H3E2 840 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 EPS8L2Q9H6S3 715 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 GOLGA2P5Q9HBQ8 144 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 CNGB3Q9NQW8 809 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ACSS2Q9NR19 701 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ZDHHC7Q9NXF8 308 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 GIN1Q9NXP7 522 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 CFAP99D6REC4 459 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 AP3B1O00203 1094 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 DCXO43602 365 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 NOL3O60936 208 aaKnown RBP9.53□□□□□ -0.88
SMG6-202ENST00000354901 KCNH1O95259 989 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ENDOUP21128 410 aaKnown RBP9.53□□□□□ -0.88
SMG6-202ENST00000354901 LMO2P25791 158 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ATICP31939 592 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 GSSP48637 474 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 NUDT2P50583 147 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 PITX1P78337 314 aaPredicted RBP9.53□□□□□ -0.88
SMG6-202ENST00000354901 PDK2Q15119 407 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 GPR162Q16538 588 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 TIGD2Q4W5G0 525 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 FGD3Q5JSP0 725 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 AAGABQ6PD74 315 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 SETD3Q86TU7 594 aaPredicted RBP9.53□□□□□ -0.88
SMG6-202ENST00000354901 TP53INP2Q8IXH6 220 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 HACE1Q8IYU2 909 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 MARVELD2Q8N4S9 558 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 IRGQQ8WZA9 623 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 KHSRPQ92945 711 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMG6-202ENST00000354901 CNTN3Q9P232 1028 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
SMG6-202ENST00000354901 MRPL42Q9Y6G3 142 aaKnown RBP9.53□□□□□ -0.88
SMG6-202ENST00000354901 ANK1P16157 1881 aa9.53□□□□□ -0.88
SMG6-202ENST00000354901 A0A0G2JLL6 359 aaPredicted RBP9.52□□□□□ -0.88
SMG6-202ENST00000354901 HMX2A2RU54 273 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 TSPAN1O60635 241 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 SPAG6O75602 509 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 ALDH2P05091 517 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 PTPN1P18031 435 aaKnown RBP9.52□□□□□ -0.88
SMG6-202ENST00000354901 CDK9P50750 372 aaKnown RBP9.52□□□□□ -0.88
SMG6-202ENST00000354901 STX3Q13277 289 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 PPIL2Q13356 520 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 CAMK2BQ13554 666 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 DNASE1L3Q13609 305 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 SPIDRQ14159 915 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 HSF5Q4G112 596 aaPredicted RBP9.52□□□□□ -0.88
SMG6-202ENST00000354901 PPM1JQ5JR12 505 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 TMEM26Q6ZUK4 368 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 PRRT2Q7Z6L0 340 aaPredicted RBP9.52□□□□□ -0.88
SMG6-202ENST00000354901 NAT16Q8N8M0 369 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 SIGLEC10Q96LC7 697 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 BTBD9Q96Q07 612 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 NAA50Q9GZZ1 169 aaKnown RBP9.52□□□□□ -0.88
SMG6-202ENST00000354901 RNF38Q9H0F5 515 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 SETD4Q9NVD3 440 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 HACD3Q9P035 362 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 KCNH4Q9UQ05 1017 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 APOBEC2Q9Y235 224 aaKnown RBP9.52□□□□□ -0.88
SMG6-202ENST00000354901 DNAJC16Q9Y2G8 782 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 GPSM3Q9Y4H4 160 aa9.52□□□□□ -0.88
SMG6-202ENST00000354901 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.52□□□□□ -0.89
SMG6-202ENST00000354901 NEMP1O14524 444 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 GUCY1B2O75343 617 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 ATE1O95260 518 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 C1QAP02745 245 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 TGM2P21980 687 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 MGAT1P26572 445 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 MAP4P27816 1152 aaKnown RBP9.52□□□□□ -0.89
SMG6-202ENST00000354901 SERPINB5P36952 375 aa9.52□□□□□ -0.89
SMG6-202ENST00000354901 NR4A2P43354 598 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms