RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 BRCA2P51587 3418 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 TMEM114B3SHH9 223 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 HADHAP40939 763 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 PCID2Q5JVF3 399 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 C1orf146Q5VVC0 180 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 PKN3Q6P5Z2 889 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 SPATA2LQ8IUW3 424 aaPredicted RBP22.13■■□□□ 1.13
SHMT1-202ENST00000352886 TRIB2Q92519 343 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 IL12RB2Q99665 862 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 SMOC2Q9H3U7 446 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 GLOD4Q9HC38 313 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 ZFYVE28Q9HCC9 887 aa22.13■■□□□ 1.13
SHMT1-202ENST00000352886 TK2O00142 265 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 FGF10O15520 208 aaPredicted RBP22.12■■□□□ 1.13
SHMT1-202ENST00000352886 PHGDHO43175 533 aaKnown RBP22.12■■□□□ 1.13
SHMT1-202ENST00000352886 ANXA9O76027 345 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 HOXC13P31276 330 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 ACTR3P61158 418 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 CRHR2Q13324 411 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 DSC3Q14574 896 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 LPIN1Q14693 890 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 USP10Q14694 798 aaKnown RBP22.12■■□□□ 1.13
SHMT1-202ENST00000352886 SCG3Q8WXD2 468 aaKnown RBP22.12■■□□□ 1.13
SHMT1-202ENST00000352886 FICDQ9BVA6 458 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 GATA5Q9BWX5 397 aaPredicted RBP22.12■■□□□ 1.13
SHMT1-202ENST00000352886 ACE2Q9BYF1 805 aaPredicted RBP22.12■■□□□ 1.13
SHMT1-202ENST00000352886 SHCBP1LQ9BZQ2 653 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 UPF3AQ9H1J1 476 aaKnown RBP22.12■■□□□ 1.13
SHMT1-202ENST00000352886 MAN1C1Q9NR34 630 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 OXSMQ9NWU1 459 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 A0A088AWK7 358 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 EIF4E1BA6NMX2 242 aaKnown RBP22.12■■□□□ 1.13
SHMT1-202ENST00000352886 MATN3O15232 486 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 AVPR1AP37288 418 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 CSRP3P50461 194 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 BLMHQ13867 455 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 MANEALQ5VSG8 457 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 MOCOSQ96EN8 888 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 ZNF212Q9UDV6 495 aa22.12■■□□□ 1.13
SHMT1-202ENST00000352886 VAPBO95292 243 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 MOCS2O96007 188 aaPredicted RBP22.11■■□□□ 1.13
SHMT1-202ENST00000352886 AHSGP02765 367 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 ASGR1P07306 291 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 GABRB3P28472 473 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 ITGA7Q13683 1181 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 EPGNQ6UW88 154 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 LZTR1Q8N653 840 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 TDRD5Q8NAT2 981 aaKnown RBP22.11■■□□□ 1.13
SHMT1-202ENST00000352886 SUSD3Q96L08 255 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 C1QTNF1Q9BXJ1 281 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 ANKRD6Q9Y2G4 727 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 TNFRSF10BO14763 440 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 H2AFYO75367 372 aaKnown RBP22.11■■□□□ 1.13
SHMT1-202ENST00000352886 OR4Q2P0C623 313 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 SLC9B1Q4ZJI4 515 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 MFSD14CQ5VZR4 134 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 DENND5AQ6IQ26 1287 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 SCD5Q86SK9 330 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 DENND6AQ8IWF6 608 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 PHTF2Q8N3S3 785 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 SHKBP1Q8TBC3 707 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 MAPK15Q8TD08 544 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 TSNARE1Q96NA8 513 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 ACSS2Q9NR19 701 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 MID2Q9UJV3 735 aa22.11■■□□□ 1.13
SHMT1-202ENST00000352886 E9PBE3 544 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 DCXO43602 365 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 KLHL41O60662 606 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 RPLP2P05387 115 aaKnown RBP22.1■■□□□ 1.13
SHMT1-202ENST00000352886 HLA-DQB2P05538 268 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 APOA4P06727 396 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 SLC35E2BP0CK96 405 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 GLRBP48167 497 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 YWHAHQ04917 246 aaPredicted RBP22.1■■□□□ 1.13
SHMT1-202ENST00000352886 CTBP1Q13363 440 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 RALGPS1Q5JS13 557 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 ARTNQ5T4W7 220 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 ESRP1Q6NXG1 681 aaKnown RBP22.1■■□□□ 1.13
SHMT1-202ENST00000352886 SLC41A1Q8IVJ1 513 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 TMEM151AQ8N4L1 468 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 SLC25A41Q8N5S1 370 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 CMTM5Q96DZ9 223 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 UROC1Q96N76 676 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 NMUR1Q9HB89 426 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 MPP6Q9NZW5 540 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 CHRNGP07510 517 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 HTR7P34969 479 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 TUBP50607 506 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 MPP1Q00013 466 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 ANO7Q6IWH7 933 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 ZYG11AQ6WRX3 759 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 KDELC2Q7Z4H8 507 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 LMNTD2Q8IXW0 634 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 PPHLN1Q8NEY8 458 aaKnown RBP22.1■■□□□ 1.13
SHMT1-202ENST00000352886 KCTD4Q8WVF5 259 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 FSD1LQ9BXM9 530 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 FTHL17Q9BXU8 183 aa22.1■■□□□ 1.13
SHMT1-202ENST00000352886 RBM22Q9NW64 420 aaKnown RBP eCLIP22.1■■□□□ 1.13
SHMT1-202ENST00000352886 LIN7AO14910 233 aaPredicted RBP22.09■■□□□ 1.13
SHMT1-202ENST00000352886 PMPCBO75439 489 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms