RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 MRPL1Q9BYD6 325 aaKnown RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 SSU72Q9NP77 194 aaKnown RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 CLIC5Q9NZA1 410 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 R3HDM2Q9Y2K5 976 aaKnown RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 CLTBP09497 229 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 DUSP4Q13115 394 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 C1orf146Q5VVC0 180 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 NEPROQ6NW34 567 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 TEX9Q8N6V9 391 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 CATSPER1Q8NEC5 780 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 SH3GL1Q99961 368 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 MAGEH1Q9H213 219 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 GBA3Q9H227 469 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 SLC27A5Q9Y2P5 690 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 ORC6Q9Y5N6 252 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 CLASP2O75122 1294 aaKnown RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 CDH4P55283 916 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 RNASEH2BQ5TBB1 312 aaKnown RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 GLT6D1Q7Z4J2 308 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 MRPL10Q7Z7H8 261 aaKnown RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 SLC35B2Q8TB61 432 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 CKAP2Q8WWK9 683 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 CEP295NLQ96MC4 621 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 PKD2L2Q9NZM6 624 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 TSPAN3O60637 253 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 ASMTLO95671 621 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 CCL5P13501 91 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 POLR2EP19388 210 aaKnown RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 PGM1P36871 562 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 LBRQ14739 615 aaKnown RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 MPPE1Q53F39 396 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 FAM45BPQ6NSW5 357 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 LLGL2Q6P1M3 1020 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 AFTPHQ6ULP2 937 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 USP45Q70EL2 814 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 ARID3BQ8IVW6 561 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 FAM45AQ8TCE6 357 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 PANX3Q96QZ0 392 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 NMRK1Q9NWW6 199 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 SMPD4Q9NXE4 827 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 KIAA1522Q9P206 1035 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-201ENST00000350148 IGSF9Q9P2J2 1179 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 ZNF180Q9UJW8 692 aa12.34□□□□□ -0.43
SMAD9-201ENST00000350148 ANGPT2O15123 496 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 BIRC5O15392 142 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 TRIM13O60858 407 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 TSPAN9O75954 239 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 POU4F1Q01851 419 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 STX5Q13190 355 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 KRT80Q6KB66 452 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 TAC4Q86UU9 113 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 LEMD2Q8NC56 503 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 OR52K1Q8NGK4 314 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 TCP10LQ8TDR4 215 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 NOD2Q9HC29 1040 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 GID8Q9NWU2 228 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 UBP1Q9NZI7 540 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 TLR6Q9Y2C9 796 aa12.33□□□□□ -0.43
SMAD9-201ENST00000350148 TMA7Q9Y2S6 64 aaKnown RBP12.33□□□□□ -0.43
SMAD9-201ENST00000350148 E9PAM4 449 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 TLL1O43897 1013 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 RAP1GDS1P52306 607 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 ALDH18A1P54886 795 aaKnown RBP12.33□□□□□ -0.44
SMAD9-201ENST00000350148 MTM1Q13496 603 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 RTL3Q8N8U3 475 aaKnown RBP12.33□□□□□ -0.44
SMAD9-201ENST00000350148 OVCA2Q8WZ82 227 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 NRBF2Q96F24 287 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 RNF39Q9H2S5 420 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 MAFFQ9ULX9 164 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 A0A096LPK6 155 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 ACSL4O60488 711 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 IFI35P80217 286 aaPredicted RBP12.33□□□□□ -0.44
SMAD9-201ENST00000350148 SMAD3P84022 425 aaKnown RBP12.33□□□□□ -0.44
SMAD9-201ENST00000350148 ZDHHC20Q5W0Z9 365 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 TTC27Q6P3X3 843 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 SH3KBP1Q96B97 665 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 TWNKQ96RR1 684 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 MOSPD1Q9UJG1 213 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 TBC1D30Q9Y2I9 924 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 SLC38A8A6NNN8 435 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 QSOX1O00391 747 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 TACR2P21452 398 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 TKTP29401 623 aaKnown RBP12.33□□□□□ -0.44
SMAD9-201ENST00000350148 NDUFV1P49821 464 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 N4BP2L1Q5TBK1 243 aaPredicted RBP12.33□□□□□ -0.44
SMAD9-201ENST00000350148 ARMC3Q5W041 872 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 DENND1CQ8IV53 801 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 PPWD1Q96BP3 646 aaKnown RBP12.33□□□□□ -0.44
SMAD9-201ENST00000350148 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 LGALS13Q9UHV8 139 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 QSER1Q2KHR3 1735 aa12.33□□□□□ -0.44
SMAD9-201ENST00000350148 KCNU1A8MYU2 1149 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 NRP1O14786 923 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 MATN3O15232 486 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 IRAK2O43187 625 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 VAPBO95292 243 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 CASP2P42575 452 aa12.32□□□□□ -0.44
SMAD9-201ENST00000350148 SMAD1Q15797 465 aaKnown RBP12.32□□□□□ -0.44
SMAD9-201ENST00000350148 LRRC8EQ6NSJ5 796 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms