RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 BTBD1Q9H0C5 482 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 PCDH18Q9HCL0 1135 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 HPCAL4Q9UM19 191 aa22.54■■□□□ 1.2
SNX3-202ENST00000349379 METTL12A8MUP2 240 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 H3BRJ5 948 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 IL1BP01584 269 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 CTSLP07711 333 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 ARSEP51690 589 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 LMNB2Q03252 620 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 SFSWAPQ12872 951 aaKnown RBP22.53■■□□□ 1.2
SNX3-202ENST00000349379 HADHQ16836 314 aaKnown RBP22.53■■□□□ 1.2
SNX3-202ENST00000349379 ARHGAP12Q8IWW6 846 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 PLPP6Q8IY26 295 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 NPWQ8N729 165 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 DNASE2BQ8WZ79 361 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 HSPH1Q92598 858 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 PIGKQ92643 395 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 CCDC114Q96M63 670 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 SMOC1Q9H4F8 434 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 PDFQ9HBH1 243 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 NCKAP1Q9Y2A7 1128 aa22.53■■□□□ 1.2
SNX3-202ENST00000349379 FCF1Q9Y324 198 aaKnown RBP22.53■■□□□ 1.2
SNX3-202ENST00000349379 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.53■■□□□ 1.2
SNX3-202ENST00000349379 SEMA4FO95754 770 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 ARL4AP40617 200 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 METAP1P53582 386 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 TAS2R40P59535 323 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 SF3A2Q15428 464 aaKnown RBP22.52■■□□□ 1.2
SNX3-202ENST00000349379 FAM46CQ5VWP2 391 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 DPY19L3Q6ZPD9 716 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 CHST14Q8NCH0 376 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 TMIEQ8NEW7 156 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 PIP4K2CQ8TBX8 421 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 CASKIN2Q8WXE0 1202 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 CSPG4P5Q96PW8 444 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 SLC39A8Q9C0K1 460 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 NEUROG2Q9H2A3 272 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 TNKS2Q9H2K2 1166 aa22.52■■□□□ 1.2
SNX3-202ENST00000349379 RCOR3Q9P2K3 495 aaPredicted RBP22.52■■□□□ 1.2
SNX3-202ENST00000349379 EVLQ9UI08 416 aaPredicted RBP22.52■■□□□ 1.2
SNX3-202ENST00000349379 C1QTNF3-AMACRE9PGA6 284 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 DAPK3O43293 454 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 IL4RP24394 825 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 CHRNA3P32297 505 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 CYLC1P35663 651 aaPredicted RBP22.51■■□□□ 1.19
SNX3-202ENST00000349379 ARHGAP25P42331 645 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 MAGEA1P43355 309 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 HADHBP55084 474 aaKnown RBP22.51■■□□□ 1.19
SNX3-202ENST00000349379 INO80DQ53TQ3 878 aaPredicted RBP22.51■■□□□ 1.19
SNX3-202ENST00000349379 CARD16Q5EG05 197 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 TMTC1Q8IUR5 882 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 HDDC3Q8N4P3 179 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 VOPP1Q96AW1 172 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 CELF6Q96J87 481 aaKnown RBP22.51■■□□□ 1.19
SNX3-202ENST00000349379 OMDQ99983 421 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 C6orf106Q9H6K1 298 aaPredicted RBP22.51■■□□□ 1.19
SNX3-202ENST00000349379 IMPACTQ9P2X3 320 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 FARP1Q9Y4F1 1045 aaPredicted RBP22.51■■□□□ 1.19
SNX3-202ENST00000349379 WASF2Q9Y6W5 498 aa22.51■■□□□ 1.19
SNX3-202ENST00000349379 ATXN2Q99700 1313 aaKnown RBP22.51■■□□□ 1.19
SNX3-202ENST00000349379 SOWAHDA6NJG2 315 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 PATE3B3GLJ2 98 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 RNF103O00237 685 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 BUB1O43683 1085 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 BNIP3LO60238 219 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 RNASEH2AO75792 299 aaKnown RBP22.5■■□□□ 1.19
SNX3-202ENST00000349379 AMPD1P23109 780 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 CDH6P55285 790 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 MESDQ14696 234 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 ATP13A4Q4VNC1 1196 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 DCAF12L1Q5VU92 463 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 TCEAL6Q6IPX3 200 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 LZTR1Q8N653 840 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 TCEAL3Q969E4 200 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 MFHAS1Q9Y4C4 1052 aa22.5■■□□□ 1.19
SNX3-202ENST00000349379 EPN1Q9Y6I3 576 aaPredicted RBP22.5■■□□□ 1.19
SNX3-202ENST00000349379 DMXL1Q9Y485 3027 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 ARHGAP42A6NI28 874 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 PRR5-ARHGAP8B1AHC4 643 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 SLC7A4O43246 635 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 PRAMEF11O60813 436 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 TMCC1O94876 653 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 NDUFA10O95299 355 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 GSRP00390 522 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 PRNPP04156 253 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 RECQLP46063 649 aaPredicted RBP22.49■■□□□ 1.19
SNX3-202ENST00000349379 CCNHP51946 323 aaPredicted RBP22.49■■□□□ 1.19
SNX3-202ENST00000349379 ADPRHP54922 357 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 ARHGAP8P85298 464 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 WDR45BQ5MNZ6 344 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 SYCP2LQ5T4T6 812 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 AGBL4Q5VU57 503 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 SLC23A3Q6PIS1 610 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 LEKR1Q6ZMV7 388 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 ZNF354CQ86Y25 554 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 TMEM139Q8IV31 216 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 GANCQ8TET4 914 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 RXFP3Q9NSD7 469 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 ETNK2Q9NVF9 386 aa22.49■■□□□ 1.19
SNX3-202ENST00000349379 IL36AQ9UHA7 158 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms