RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 CCSAPQ6IQ19 270 aaPredicted RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 LYPD8Q6UX82 237 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 CYP2U1Q7Z449 544 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 OR2T3Q8NH03 318 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 CNDP1Q96KN2 507 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 STRA6Q9BX79 667 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 SEPT3Q9UH03 358 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 TRIM38O00635 465 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 CLASP2O75122 1294 aaKnown RBP16.46■□□□□ 0.23
MBD1-204ENST00000347968 MYL4P12829 197 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 TYK2P29597 1187 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 TRIM25Q14258 630 aaKnown RBP16.46■□□□□ 0.23
MBD1-204ENST00000347968 AOC3Q16853 763 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 CYP4V2Q6ZWL3 525 aaPredicted RBP16.46■□□□□ 0.23
MBD1-204ENST00000347968 ZCCHC7Q8N3Z6 543 aaKnown RBP16.46■□□□□ 0.23
MBD1-204ENST00000347968 PSMA8Q8TAA3 256 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 ZNF516Q92618 1163 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 NACC1Q96RE7 527 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 CAMKK2Q96RR4 588 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 GLT8D2Q9H1C3 349 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 EFCAB1Q9HAE3 211 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 XPNPEP3Q9NQH7 507 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 IFT80Q9P2H3 777 aaPredicted RBP16.46■□□□□ 0.23
MBD1-204ENST00000347968 EGFL7Q9UHF1 273 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 PSME2Q9UL46 239 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 ABCB1P08183 1280 aaPredicted RBP16.46■□□□□ 0.23
MBD1-204ENST00000347968 TNNI1P19237 187 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 PRKCHP24723 683 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 RHDQ02161 417 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 TCP10Q12799 353 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 ZNF846Q147U1 533 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 RSBN1Q5VWQ0 802 aaPredicted RBP16.46■□□□□ 0.23
MBD1-204ENST00000347968 TMEM206Q9H813 350 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 CAB39LQ9H9S4 337 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.46■□□□□ 0.23
MBD1-204ENST00000347968 OAZ3Q9UMX2 235 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 PCDHGC3Q9UN70 934 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 B3GNT3Q9Y2A9 372 aa16.46■□□□□ 0.23
MBD1-204ENST00000347968 SMCHD1A6NHR9 2005 aa16.46■□□□□ 0.22
MBD1-204ENST00000347968 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.45■□□□□ 0.22
MBD1-204ENST00000347968 EI24O14681 340 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 PHGDHO43175 533 aaKnown RBP16.45■□□□□ 0.22
MBD1-204ENST00000347968 DLGAP3O95886 979 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 GH2P01242 217 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 ARP10275 920 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 IRF9Q00978 393 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 NFIAQ12857 509 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 DGKDQ16760 1214 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 PTPN20Q4JDL3 420 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 SLCO6A1Q86UG4 719 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 GATAD2AQ86YP4 633 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 TNIP2Q8NFZ5 429 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 RP9Q8TA86 221 aaKnown RBP16.45■□□□□ 0.22
MBD1-204ENST00000347968 ADNPQ9H2P0 1102 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 DHX33Q9H6R0 707 aaKnown RBP16.45■□□□□ 0.22
MBD1-204ENST00000347968 LTB4R2Q9NPC1 389 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 MTRRQ9UBK8 725 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 SLCO3A1Q9UIG8 710 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 DSEQ9UL01 958 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 MYO18AQ92614 2054 aaKnown RBP16.45■□□□□ 0.22
MBD1-204ENST00000347968 TCAF2A6NFQ2 919 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 MEN1O00255 615 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 SNPHO15079 494 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 SAT1P21673 171 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 KDELR1P24390 212 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 NME5P56597 212 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 PLEKHG7Q6ZR37 379 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 FRA10AC1Q70Z53 315 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 SDR16C5Q8N3Y7 309 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 NETO2Q8NC67 525 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 ELMO1Q92556 727 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 CITED4Q96RK1 184 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 COQ7Q99807 217 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 UBE4BO95155 1302 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 ANKRD12Q6UB98 2062 aa16.45■□□□□ 0.22
MBD1-204ENST00000347968 WDR27A2RRH5 827 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 H0Y858 1186 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 TBX3O15119 743 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 IDH3BO43837 385 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 GLRA3O75311 464 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 USP12O75317 370 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 RBL1P28749 1068 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 ACOT2P49753 483 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 GLRA4Q5JXX5 417 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 FAM102BQ5T8I3 360 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 IL31Q6EBC2 164 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
MBD1-204ENST00000347968 BBS12Q6ZW61 710 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 MAGEE2Q8TD90 523 aaPredicted RBP16.44■□□□□ 0.22
MBD1-204ENST00000347968 ZNF341Q9BYN7 854 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 CDY2AQ9Y6F7 541 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 CDY1Q9Y6F8 540 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 BCAS1O75363 584 aaPredicted RBP16.44■□□□□ 0.22
MBD1-204ENST00000347968 SNAP29O95721 258 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 SPNP16150 400 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 MYF6P23409 242 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 SREBF1P36956 1147 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 HARS2P49590 506 aaKnown RBP16.44■□□□□ 0.22
MBD1-204ENST00000347968 ECT2LQ008S8 904 aa16.44■□□□□ 0.22
MBD1-204ENST00000347968 PPP4R4Q6NUP7 873 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms