RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 BHMG1C9JSJ3 638 aaPredicted RBP19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 GJB3O75712 270 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 METTL18O95568 372 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 POLR2EP19388 210 aaKnown RBP19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 HNRNPDQ14103 355 aaKnown RBP19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 PPP1R7Q15435 360 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 MARC1Q5VT66 337 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 MAATS1Q7Z4T9 603 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 CCDC89Q8N998 374 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 ACDQ96AP0 544 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 TEKT5Q96M29 485 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 ZNF599Q96NL3 588 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 TRIM31Q9BZY9 425 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 CIPCQ9C0C6 399 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 NT5MQ9NPB1 228 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 ELOVL2Q9NXB9 296 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 KLHL8Q9P2G9 620 aaPredicted RBP19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 FEZ2Q9UHY8 353 aaPredicted RBP19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 SLCO3A1Q9UIG8 710 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 DUSP12Q9UNI6 340 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 ERVW-1Q9UQF0 538 aa19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 FCF1Q9Y324 198 aaKnown RBP19.34■□□□□ 0.69
CHMP4A-201ENST00000347519 TTC24A2A3L6 582 aaPredicted RBP19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 MTSS1O43312 755 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 TMCC1O94876 653 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 KAT7O95251 611 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 GAS8O95995 478 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 SRCP12931 536 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 IVDP26440 423 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 MMP13P45452 471 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 RGRP47804 291 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 SERPINH1P50454 418 aaKnown RBP19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 TERF1P54274 439 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 MAXP61244 160 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 ECT2LQ008S8 904 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 PTPRNQ16849 979 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 P3H1Q32P28 736 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 FAXCQ5TGI0 409 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 PID1Q7Z2X4 250 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 TSEN2Q8NCE0 465 aaKnown RBP19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 MYO19Q96H55 970 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 NSMCE3Q96MG7 304 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 P2RY13Q9BPV8 354 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 GORASP1Q9BQQ3 440 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 CD320Q9NPF0 282 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 LHX3Q9UBR4 397 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 ATP8A1Q9Y2Q0 1164 aa19.33■□□□□ 0.69
CHMP4A-201ENST00000347519 ZNF821O75541 412 aaPredicted RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 HEXIM1O94992 359 aaKnown RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 NFKB1P19838 968 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 RENBPP51606 427 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 GPS1Q13098 491 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 IHHQ14623 411 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 PON2Q15165 354 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 SLC44A4Q53GD3 710 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 RETSATQ6NUM9 610 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 SYDE1Q6ZW31 735 aaPredicted RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 RALGPS2Q86X27 583 aaPredicted RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 RNF135Q8IUD6 432 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 ERP44Q9BS26 406 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 DPH5Q9H2P9 285 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 C8orf33Q9H7E9 229 aaPredicted RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 ZDHHC4Q9NPG8 344 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 ASIC3Q9UHC3 531 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 HS3ST2Q9Y278 367 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 SNX24Q9Y343 169 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 ESYT3A0FGR9 886 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 TBC1D3BA6NDS4 549 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 TNFRSF10AO00220 468 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 OPHN1O60890 802 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 APODP05090 189 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 CHRM1P11229 460 aaPredicted RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 PSMB4P28070 264 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 GRIA2P42262 883 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 RPL21P46778 160 aaKnown RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 PFKPQ01813 784 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 NIPAL4Q0D2K0 466 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 RFTN1Q14699 578 aaPredicted RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 ERCC6LQ2NKX8 1250 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 GLE1Q53GS7 698 aaKnown RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 INO80DQ53TQ3 878 aaPredicted RBP19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 DGKKQ5KSL6 1271 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 EMC10Q5UCC4 262 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 DUPD1Q68J44 220 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 FSTL4Q6MZW2 842 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 SH2D3CQ8N5H7 860 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 ATP11CQ8NB49 1132 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 NSMCE1Q8WV22 266 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 EXOC2Q96KP1 924 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 ANKZF1Q9H8Y5 726 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 GLOD4Q9HC38 313 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 PAK5Q9P286 719 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 SEPT3Q9UH03 358 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 SLC25A13Q9UJS0 675 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 TRHDEQ9UKU6 1024 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 SORCS3Q9UPU3 1222 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 TTLL3Q9Y4R7 772 aa19.32■□□□□ 0.68
CHMP4A-201ENST00000347519 ATG2BQ96BY7 2078 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms