RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 SPC25Q9HBM1 224 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 NMRK1Q9NWW6 199 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 AAR2Q9Y312 384 aaKnown RBP15.69■□□□□ 0.1
UPF3B-202ENST00000345865 WASF2Q9Y6W5 498 aa15.69■□□□□ 0.1
UPF3B-202ENST00000345865 A0A1W2PQH9 124 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 KCNU1A8MYU2 1149 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 MATN3O15232 486 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 DDHD2O94830 711 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 CD1EP15812 388 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 CCND3P30281 292 aaPredicted RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 ADRA1AP35348 466 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 GCKP35557 465 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 AVPR1AP37288 418 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 ARCN1P48444 511 aaKnown RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 NKX3-2P78367 333 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 MPP1Q00013 466 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 CTBP1Q13363 440 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 ZNF460Q14592 562 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 SLC9B1Q4ZJI4 515 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 PCID2Q5JVF3 399 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 SNX30Q5VWJ9 437 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 PDPK2PQ6A1A2 396 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 KDELC2Q7Z4H8 507 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 LINC00523Q86TU6 105 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 RTN4RL1Q86UN2 441 aaPredicted RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 THEM5Q8N1Q8 247 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 PHTF2Q8N3S3 785 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 AGR3Q8TD06 166 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 HS3ST4Q9Y661 456 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 A0A088AWK7 358 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 EIF4E1BA6NMX2 242 aaKnown RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 TRIM13O60858 407 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 VAPBO95292 243 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 CHRNGP07510 517 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 SLC10A3P09131 477 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 SLC35E2BP0CK96 405 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 CHRNA4P43681 627 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 GPR15P49685 360 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 TUBP50607 506 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 YWHAHQ04917 246 aaPredicted RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 MAPRE1Q15691 268 aaKnown RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 TRIM71Q2Q1W2 868 aaKnown RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 ANO4Q32M45 955 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 SLC39A12Q504Y0 691 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 RALGPS1Q5JS13 557 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 TRIM68Q6AZZ1 485 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 RIPOR1Q6ZS17 1223 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 ARHGAP24Q8N264 748 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 ANKRD27Q96NW4 1050 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 FAM167BQ9BTA0 163 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 CDH19Q9H159 772 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 RHOJQ9H4E5 214 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 NOL6Q9H6R4 1146 aaKnown RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 OXSMQ9NWU1 459 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 STX18Q9P2W9 335 aaKnown RBP15.68■□□□□ 0.1
UPF3B-202ENST00000345865 STOML1Q9UBI4 398 aa15.68■□□□□ 0.1
UPF3B-202ENST00000345865 FAM155AB1AL88 458 aaPredicted RBP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 E9PAM4 449 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 ZBTB14O43829 449 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 PMPCBO75439 489 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 KLHL2O95198 593 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 GLRBP48167 497 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 MXRA7P84157 204 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 SLC34A1Q06495 639 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 PEX6Q13608 980 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 USP10Q14694 798 aaKnown RBP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 CCDC6Q16204 474 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 DNAL1Q4LDG9 190 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 AFMIDQ63HM1 303 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 EPGNQ6UW88 154 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 RAPH1Q70E73 1250 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 SLC41A1Q8IVJ1 513 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 CEP97Q8IW35 865 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 SCN4BQ8IWT1 228 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 CENPLQ8N0S6 344 aaPredicted RBP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 KLHDC9Q8NEP7 349 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 KCTD4Q8WVF5 259 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 ZNF333Q96JL9 665 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 MRGPRX2Q96LB1 330 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 ACE2Q9BYF1 805 aaPredicted RBP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 TASP1Q9H6P5 420 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 RBM22Q9NW64 420 aaKnown RBP eCLIP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 FGF10O15520 208 aaPredicted RBP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 PSMD3O43242 534 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 SORBS2O94875 1100 aaKnown RBP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 HSPA4LO95757 839 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 TYMPP19971 482 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 ATP6V1C1P21283 382 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 PAPOLAP51003 745 aaKnown RBP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 NOMO2Q5JPE7 1267 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 PIK3R6Q5UE93 754 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 NET1Q7Z628 596 aaPredicted RBP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 CNTN4Q8IWV2 1026 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 SLC25A41Q8N5S1 370 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 CATSPERBQ9H7T0 1116 aa15.67■□□□□ 0.1
UPF3B-202ENST00000345865 ABI2Q9NYB9 513 aaPredicted RBP15.67■□□□□ 0.1
UPF3B-202ENST00000345865 F8W8V4 182 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 ANXA9O76027 345 aa15.66■□□□□ 0.1
UPF3B-202ENST00000345865 NCF2P19878 526 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms