RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 RNF225M0QZC1 329 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 PPP6R2O75170 966 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 LYNP07948 512 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 PIM1P11309 404 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 FDPSP14324 419 aaKnown RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CSE1LP55060 971 aaKnown RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 MAGOHP61326 146 aaKnown RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 YWHAEP62258 255 aaKnown RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CTAG1AP78358 180 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 ODF2Q5BJF6 829 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 DEPDC1Q5TB30 811 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 SHC4Q6S5L8 630 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 PRSS55Q6UWB4 352 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 Q6ZNX1 250 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 MARK2Q7KZI7 788 aaKnown RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 TICAM1Q8IUC6 712 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 AGGF1Q8N302 714 aaeCLIP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 OR2T3Q8NH03 318 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CASKIN2Q8WXE0 1202 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 TTC9Q92623 222 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 MAGOHBQ96A72 148 aaKnown RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 DNAJC7Q99615 494 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 ELAC2Q9BQ52 826 aaKnown RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 SLC39A3Q9BRY0 314 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 THAP9Q9H5L6 903 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 DCLRE1BQ9H816 532 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 TMPRSS4Q9NRS4 437 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 STOML1Q9UBI4 398 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 TAF6LQ9Y6J9 622 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 SMIM31A0A1B0GVY4 71 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 ZNF840PA6NDX5 716 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 KPNA7A9QM74 516 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 BHMG1C9JSJ3 638 aaPredicted RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 B3GAT3O94766 335 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 UNC5CO95185 931 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CYP17A1P05093 508 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 ADH5P11766 374 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CHKAP35790 457 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 TMPRSS3P57727 454 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 PLA2G4FQ68DD2 849 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 UNC13DQ70J99 1090 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 ADGRG2Q8IZP9 1017 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 C3orf58Q8NDZ4 430 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 TMEM143Q96AN5 459 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 LRRC45Q96CN5 670 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CHP1Q99653 195 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CCT7Q99832 543 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 DUSP23Q9BVJ7 150 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 DRC3Q9H069 523 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 CCDC68Q9H2F9 335 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 EPB41L5Q9HCM4 733 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 RBM12Q9NTZ6 932 aaKnown RBP7.5□□□□□ -1.21
ZNF540-202ENST00000343599 ATAD3AQ9NVI7 634 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 NDUFA13Q9P0J0 144 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 RNF14Q9UBS8 474 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 DNMT3LQ9UJW3 386 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 USH1CQ9Y6N9 552 aa7.5□□□□□ -1.21
ZNF540-202ENST00000343599 MTRF1O75570 445 aaKnown RBP7.49□□□□□ -1.21
ZNF540-202ENST00000343599 HEXIM1O94992 359 aaKnown RBP7.49□□□□□ -1.21
ZNF540-202ENST00000343599 CCNE1P24864 410 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 IL12RB1P42701 662 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 MMP13P45452 471 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 CSRP3P50461 194 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 SOX4Q06945 474 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-202ENST00000343599 MSLNQ13421 630 aaPredicted RBP7.49□□□□□ -1.21
ZNF540-202ENST00000343599 TRA2AQ13595 282 aaKnown RBP eCLIP7.49□□□□□ -1.21
ZNF540-202ENST00000343599 PROX2Q3B8N5 592 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 FKBP15Q5T1M5 1219 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 RHBDF2Q6PJF5 856 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 CARFQ8N187 725 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 PAF1Q8N7H5 531 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 AVL9Q8NBF6 648 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 ADAM32Q8TC27 787 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 RSAD2Q8WXG1 361 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 RAD54LQ92698 747 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 MPP4Q96JB8 637 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 GBA3Q9H227 469 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 ARRDC1-AS1Q9H2J1 176 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 ARNT2Q9HBZ2 717 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 MKS1Q9NXB0 559 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 TAGLN3Q9UI15 199 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 PCDHGC3Q9UN70 934 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 HYOU1Q9Y4L1 999 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 E9PBE3 544 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 MATN2O00339 956 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 SORBS3O60504 671 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 ATP5HO75947 161 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 AFPP02771 609 aaKnown RBP7.49□□□□□ -1.21
ZNF540-202ENST00000343599 ETS2P15036 469 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 ECHS1P30084 290 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 AVPR1AP37288 418 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 LSSP48449 732 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 RAB15P59190 212 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 DCTN2Q13561 401 aaKnown RBP7.49□□□□□ -1.21
ZNF540-202ENST00000343599 TDRD10Q5VZ19 366 aaKnown RBP7.49□□□□□ -1.21
ZNF540-202ENST00000343599 NLRP8Q86W28 1048 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 ZBED8Q8IZ13 594 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 BBS5Q8N3I7 341 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 LILRB2Q8N423 598 aa7.49□□□□□ -1.21
ZNF540-202ENST00000343599 TERB1Q8NA31 727 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms