RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TANKQ92844 425 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 PBXIP1Q96AQ6 731 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 PPP1R10Q96QC0 940 aaKnown RBP9.82□□□□□ -0.84
HOXA1-201ENST00000343060 KCTD15Q96SI1 283 aaPredicted RBP9.82□□□□□ -0.84
HOXA1-201ENST00000343060 TCF12Q99081 682 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 MPHOSPH6Q99547 160 aaKnown RBP9.82□□□□□ -0.84
HOXA1-201ENST00000343060 CORO1BQ9BR76 489 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 TCHPQ9BT92 498 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 DCUN1D5Q9BTE7 237 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 YIPF2Q9BWQ6 316 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 PAIP1Q9H074 479 aaKnown RBP9.82□□□□□ -0.84
HOXA1-201ENST00000343060 BRD8Q9H0E9 1235 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 LRRC40Q9H9A6 602 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 CXorf21Q9HAI6 301 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 CACNA2D2Q9NY47 1150 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 ADA2Q9NZK5 511 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 AFG3L2Q9Y4W6 797 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 SNX13Q9Y5W8 968 aa9.82□□□□□ -0.84
HOXA1-201ENST00000343060 RLFQ13129 1914 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 ZCWPW2A0A1B0GU75 182 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 PRORSD1PA6NEY8 169 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 K7EPI3 171 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 MAFO75444 373 aaPredicted RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 ZBTB11O95625 1053 aaPredicted RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 TCN1P20061 433 aaPredicted RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 ATICP31939 592 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 CCR10P46092 362 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 GLUD2P49448 558 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 RPS3AP61247 264 aaKnown RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 PRKCQQ04759 706 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 MAPRE2Q15555 327 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 PKDCCQ504Y2 493 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 CCDC92Q53HC0 331 aaPredicted RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 AARS2Q5JTZ9 985 aaKnown RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 FAM182BQ5T319 152 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 GK5Q6ZS86 529 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 ZBTB49Q6ZSB9 765 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 ANKRD52Q8NB46 1076 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 THAP11Q96EK4 314 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 PCDHAC1Q9H158 963 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 PICK1Q9NRD5 415 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 SMOXQ9NWM0 555 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 SELENONQ9NZV5 590 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 TMEM181Q9P2C4 612 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 KIAA1257Q9ULG3 409 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 HES2Q9Y543 173 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 RIPK3Q9Y572 518 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 SLC30A1Q9Y6M5 507 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 MYO18AQ92614 2054 aaKnown RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 COL11A1P12107 1806 aaPredicted RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 CCDC162PA2VCL2 907 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 TRPC5OSA6NMA1 111 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 KCNU1A8MYU2 1149 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 TMX2-CTNND1H3BSU7 103 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 TK2O00142 265 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 RNF103O00237 685 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 SNAP91O60641 907 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 UGT1A6P19224 532 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 UGT1A1P22309 533 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 UGT1A4P22310 534 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 PSMB4P28070 264 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 ICAM3P32942 547 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 UGT1A3P35503 534 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 UGT1A5P35504 534 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 SLC6A3Q01959 620 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 STX5Q13190 355 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 GLRA4Q5JXX5 417 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 MAP1SQ66K74 1059 aaPredicted RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 REP15Q6BDI9 236 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 ANKRD26P1Q6NSI1 321 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 FAM45BPQ6NSW5 357 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 GADL1Q6ZQY3 521 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 PTAR1Q7Z6K3 402 aaPredicted RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 FAM83AQ86UY5 434 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 REPS2Q8NFH8 660 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 FAM45AQ8TCE6 357 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 TRUB1Q8WWH5 349 aaKnown RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 MARK4Q96L34 752 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 GPR22Q99680 433 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 GPATCH1Q9BRR8 931 aaKnown RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 CCDC68Q9H2F9 335 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 DHX35Q9H5Z1 703 aaKnown RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 CAB39LQ9H9S4 337 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 MRM3Q9HC36 420 aaKnown RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 SPAG4Q9NPE6 437 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 C8orf4Q9NR00 106 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 GGA3Q9NZ52 723 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 RCOR3Q9P2K3 495 aaPredicted RBP9.81□□□□□ -0.84
HOXA1-201ENST00000343060 TSPAN16Q9UKR8 245 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 AP4E1Q9UPM8 1137 aa9.81□□□□□ -0.84
HOXA1-201ENST00000343060 YDJCA8MPS7 323 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 VWA5AO00534 786 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 NPHS1O60500 1241 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 ESRRBO95718 433 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 CD247P20963 164 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 SP2Q02086 613 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 SQLEQ14534 574 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 RAB39AQ14964 217 aa9.8□□□□□ -0.84
HOXA1-201ENST00000343060 SLC36A3Q495N2 470 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms