RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PCDHB7Q9Y5E2 793 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 SLC15A5A6NIM6 579 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 BTN3A1O00481 513 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 PGM3O95394 542 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 PGK1P00558 417 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 ATXN8OSP0DMR3 200 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 PIK3R1P27986 724 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 CD86P42081 329 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 CRYBB1P53674 252 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 MAXP61244 160 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 KRT72Q14CN4 511 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 CYP51A1Q16850 503 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 AAGABQ6PD74 315 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 FBXW8Q8N3Y1 598 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 CCDC185Q8N715 623 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 MYLPFQ96A32 169 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 QKIQ96PU8 341 aaKnown RBP eCLIP7.29□□□□□ -1.24
VCAN-202ENST00000342785 TRAPPC9Q96Q05 1148 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 GPR88Q9GZN0 384 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 DTLQ9NZJ0 730 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 KDM3BQ7LBC6 1761 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TCRBV7S3A2A0A539 114 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TMEM114B3SHH9 223 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 PEX1O43933 1283 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 GCATO75600 419 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 SMNDC1O75940 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
VCAN-202ENST00000342785 PIRTP0C851 137 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 TSPAN8P19075 237 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 MSX2P35548 267 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 ATXN1P54253 815 aaKnown RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 GAD2Q05329 585 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 LRRC49Q8IUZ0 686 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 SEMA3CQ99985 751 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 GATA5Q9BWX5 397 aaPredicted RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 EIF2AQ9BY44 585 aaKnown RBP7.29□□□□□ -1.24
VCAN-202ENST00000342785 IPPQ9Y573 584 aa7.29□□□□□ -1.24
VCAN-202ENST00000342785 H7C4K7 107 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 DEAF1O75398 565 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 LDLRP01130 860 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 FCGR1AP12314 374 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 LBPP18428 481 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 ATP6V1B2P21281 511 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 LRPAP1P30533 357 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 CLCN5P51795 746 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 KPNA1P52294 538 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 LRRC74AQ0VAA2 488 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 ZBTB17Q13105 803 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 NRF1Q16656 503 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 LIPMQ5VYY2 423 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 DNAJC14Q6Y2X3 702 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 USP50Q70EL3 339 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 FNDC5Q8NAU1 212 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 OR9Q1Q8NGQ5 310 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 SNRNP27Q8WVK2 155 aaKnown RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 MRPL57Q9BQC6 102 aaKnown RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 FAM192AQ9GZU8 254 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 GLOD4Q9HC38 313 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 SCUBE2Q9NQ36 999 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 DDX18Q9NVP1 670 aaKnown RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 KANSL3Q9P2N6 904 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 SEPT3Q9UH03 358 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 PCDHB8Q9UN66 801 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 TRAFD1O14545 582 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 SERPINB10P48595 397 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 VWA5B1Q5TIE3 1220 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 MIER2Q8N344 545 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 CARNMT1Q8N4J0 409 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 PDGFDQ9GZP0 370 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 SEMA4BQ9NPR2 832 aaPredicted RBP7.28□□□□□ -1.24
VCAN-202ENST00000342785 IRAK4Q9NWZ3 460 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.28□□□□□ -1.243e-9■■■□□ 17.2
VCAN-202ENST00000342785 MPP6Q9NZW5 540 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 TMEM216Q9P0N5 145 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 NR2E3Q9Y5X4 410 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 MAGEC1O60732 1142 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 SLC2A4P14672 509 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 GPX6P59796 221 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 DMC1Q14565 340 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 GSTA3Q16772 222 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 EMC10Q5UCC4 262 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 HPS6Q86YV9 775 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 ZNF567Q8N184 647 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 STAG3L4Q8TBR4 150 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 FAXDC2Q96IV6 333 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 DPEP3Q9H4B8 488 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 ACSS2Q9NR19 701 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 FAM105AQ9NUU6 356 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 PTPRJQ12913 1337 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 KATNA1O75449 491 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 FMO4P31512 558 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 GRIA1P42261 906 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 METTL21CQ5VZV1 264 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 RAP1GAP2Q684P5 730 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 C10orf82Q8WW14 230 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 RNF145Q96MT1 663 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 CDH19Q9H159 772 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 SCN3BQ9NY72 215 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 RBPJLQ9UBG7 517 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 STYXL1Q9Y6J8 313 aa7.28□□□□□ -1.24
VCAN-202ENST00000342785 MYH2Q9UKX2 1941 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms