RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 WNT1P04628 370 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 MAT2AP31153 395 aaKnown RBP20.58■□□□□ 0.89
SYNE2-201ENST00000341472 L1CAMP32004 1257 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 ACVRL1P37023 503 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 SERPINH1P50454 418 aaKnown RBP20.58■□□□□ 0.89
SYNE2-201ENST00000341472 RPL7AP62424 266 aaKnown RBP20.58■□□□□ 0.89
SYNE2-201ENST00000341472 PPP2CBP62714 309 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 PPP2CAP67775 309 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 ARF5P84085 180 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 IQCB1Q15051 598 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 SKOR2Q2VWA4 1001 aaPredicted RBP20.58■□□□□ 0.89
SYNE2-201ENST00000341472 CARD16Q5EG05 197 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 PPP1R15BQ5SWA1 713 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 PRAMEF14Q5SWL7 426 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 C22orf39Q6P5X5 142 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 DPY19L3Q6ZPD9 716 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 NLRP14Q86W24 1093 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 PCDH20Q8N6Y1 951 aaKnown RBP20.58■□□□□ 0.89
SYNE2-201ENST00000341472 ARHGEF2Q92974 986 aaKnown RBP20.58■□□□□ 0.89
SYNE2-201ENST00000341472 MCEEQ96PE7 176 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 SYT11Q9BT88 431 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 FUCA2Q9BTY2 467 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 MAGEH1Q9H213 219 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 NDFIP2Q9NV92 336 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 TAS2R14Q9NYV8 317 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 ARHGAP20Q9P2F6 1191 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 IL36AQ9UHA7 158 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 HPCAL4Q9UM19 191 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 DMTF1Q9Y222 760 aa20.58■□□□□ 0.89
SYNE2-201ENST00000341472 CEP192Q8TEP8 1941 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 A0A1B0GTH6 734 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 LRRC53A6NM62 1247 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 TMCO5BA8MYB1 307 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 TLR4O00206 839 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 CCP110O43303 1012 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 PCDHGA12O60330 932 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 ZNF821O75541 412 aaPredicted RBP20.57■□□□□ 0.88
SYNE2-201ENST00000341472 DESP17661 470 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 CCT8P50990 548 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 SCAPQ12770 1279 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 NR1I3Q14994 352 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 ST3GAL2Q16842 350 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 EFHC2Q5JST6 749 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 SFMBT2Q5VUG0 894 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 NAPEPLDQ6IQ20 393 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 NEK5Q6P3R8 708 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 GLRX5Q86SX6 157 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 TRIM69Q86WT6 500 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 CHCHD4Q8N4Q1 142 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 ARRDC3Q96B67 414 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 HEPHQ9BQS7 1158 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 EDEM3Q9BZQ6 932 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 PREBQ9HCU5 417 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 GDF3Q9NR23 364 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 PARVAQ9NVD7 372 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 AIPL1Q9NZN9 384 aa20.57■□□□□ 0.88
SYNE2-201ENST00000341472 APOBEC2Q9Y235 224 aaKnown RBP20.57■□□□□ 0.88
SYNE2-201ENST00000341472 A0A1B0GTQ1 180 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 CXorf51AA0A1B0GTR3 108 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 RAMP2O60895 175 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 GEMIN4P57678 1058 aaKnown RBP20.56■□□□□ 0.88
SYNE2-201ENST00000341472 TAS2R38P59533 333 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 TPM4P67936 248 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 STAT4Q14765 748 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 POLD3Q15054 466 aaPredicted RBP20.56■□□□□ 0.88
SYNE2-201ENST00000341472 PIP5KL1Q5T9C9 394 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 ERN2Q76MJ5 926 aaKnown RBP20.56■□□□□ 0.88
SYNE2-201ENST00000341472 MFSD2AQ8NA29 543 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 ISG20Q96AZ6 181 aaKnown RBP20.56■□□□□ 0.88
SYNE2-201ENST00000341472 ELF4Q99607 663 aaPredicted RBP20.56■□□□□ 0.88
SYNE2-201ENST00000341472 HDAC8Q9BY41 377 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 HAUS4Q9H6D7 363 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 FCF1Q9Y324 198 aaKnown RBP20.56■□□□□ 0.88
SYNE2-201ENST00000341472 NEUROG3Q9Y4Z2 214 aa20.56■□□□□ 0.88
SYNE2-201ENST00000341472 CABIN1Q9Y6J0 2220 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 RNGTTO60942 597 aaKnown RBP20.55■□□□□ 0.88
SYNE2-201ENST00000341472 LEFTY1O75610 366 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 CD160O95971 181 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 FTH1P19P0C7X4 201 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 EPHB2P29323 1055 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 GRK6P43250 576 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 AIF1P55008 147 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 MAMLD1Q13495 774 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 KLHL40Q2TBA0 621 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 SETMARQ53H47 684 aaPredicted RBP20.55■□□□□ 0.88
SYNE2-201ENST00000341472 PLPP6Q8IY26 295 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 PYROXD2Q8N2H3 581 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 PNPLA1Q8N8W4 532 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 GRIN3AQ8TCU5 1115 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 PPP1R16AQ96I34 528 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 FZD10Q9ULW2 581 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 BTBD3Q9Y2F9 522 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 ACTL7AQ9Y615 435 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 WASF2Q9Y6W5 498 aa20.55■□□□□ 0.88
SYNE2-201ENST00000341472 A0A1W2PQU0 124 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 SYCE3A1L190 88 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 PRAMEF26H0Y7S4 382 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 KDELR3O43731 214 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 CREB3O43889 395 aa20.54■□□□□ 0.88
SYNE2-201ENST00000341472 MAGEC1O60732 1142 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms