RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 HARS2P49590 506 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 NCALDP61601 193 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 DEFB103AP81534 67 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 GRM3Q14832 879 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 GEN1Q17RS7 908 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 CYB5D1Q6P9G0 228 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 TRAF7Q6Q0C0 670 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 TPGS1Q6ZTW0 290 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 RPS27LQ71UM5 84 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 ARHGAP12Q8IWW6 846 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 KCTD4Q8WVF5 259 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 VPS39Q96JC1 886 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 SARS2Q9NP81 518 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 COMMD10Q9Y6G5 202 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 ANKRD12Q6UB98 2062 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 HMX2A2RU54 273 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 CSF2RAP15509 400 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 TWF1Q12792 350 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 USP4Q13107 963 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 PTPRRQ15256 657 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 ARCQ7LC44 396 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 RTL3Q8N8U3 475 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 MZB1Q8WU39 189 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 LRRC39Q96DD0 335 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 TRIM62Q9BVG3 475 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 OXCT2Q9BYC2 517 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 TM6SF2Q9BZW4 377 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 SMG9Q9H0W8 520 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 IGSF9Q9P2J2 1179 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 LOC100653049A0A140TA62 436 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 C2orf78A6NCI8 922 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 SLC38A8A6NNN8 435 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 KRT34O76011 436 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 CKMP06732 381 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 KRT16P08779 473 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 PRKCHP24723 683 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 SERPINB9P50453 376 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 SEMA3BQ13214 749 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 BRMS1LQ5PSV4 323 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 C4orf22Q6V702 233 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 HIPK4Q8NE63 616 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 MCUR1Q96AQ8 359 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 EBF4Q9BQW3 602 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 L3MBTL1Q9Y468 752 aa10.33□□□□□ -0.76
RBFOX1-202ENST00000340209 MAFKO60675 156 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 IGHA2P01877 340 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 MLLT6P55198 1093 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 PEX6Q13608 980 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 IKBKEQ14164 716 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 CSHL1Q14406 222 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ATG16L1Q676U5 607 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 LRRC43Q8N309 656 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 PAWRQ96IZ0 340 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 RXFP1Q9HBX9 757 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 BPIFA1Q9NP55 256 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 PNPOQ9NVS9 261 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ARHGEF38Q9NXL2 777 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 TRHDEQ9UKU6 1024 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ZFP37Q9Y6Q3 630 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 MTSS1O43312 755 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ZMPSTE24O75844 475 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ANXA9O76027 345 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 OAZ2O95190 189 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 RAG1P15918 1043 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ATF6P18850 670 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ATP5C1P36542 298 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 SCAPQ12770 1279 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 RPAINQ86UA6 219 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 MARK4Q96L34 752 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 PKMYT1Q99640 499 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 GORASP1Q9BQQ3 440 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 KDM4CQ9H3R0 1056 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 PPCSQ9HAB8 311 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 RUVBL2Q9Y230 463 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 AAR2Q9Y312 384 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 PRSS56P0CW18 603 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ESRRAP11474 423 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 CORO1AP31146 461 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 UBAP2LQ14157 1087 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 GPNMBQ14956 572 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 USP41Q3LFD5 358 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 TXNDC8Q6A555 127 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ANKS3Q6ZW76 656 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 CCDC134Q9H6E4 229 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 ATP13A1Q9HD20 1204 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 PACSIN3Q9UKS6 424 aa10.32□□□□□ -0.76
RBFOX1-202ENST00000340209 NEMP2A6NFY4 417 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 DCTN3O75935 186 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 C2P06681 752 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 ALADP13716 330 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 NEK3P51956 506 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 GEMP55040 296 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 CYP4F8P98187 520 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 CDK16Q00536 496 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 SPANXN3Q5MJ09 141 aa10.31□□□□□ -0.76
RBFOX1-202ENST00000340209 ZNF697Q5TEC3 545 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms