RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MTCH2Q9Y6C9 303 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 AGPSO00116 658 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SNAP91O60641 907 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MT-CYBP00156 380 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 IFNAR2P48551 515 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ATAT1Q5SQI0 421 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 RNF43Q68DV7 783 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 KCTD11Q693B1 232 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CES5AQ6NT32 575 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MTERF4Q7Z6M4 381 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ADGRG2Q8IZP9 1017 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 AGGF1Q8N302 714 aaeCLIP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PGBD5Q8N414 524 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 FBXO36Q8NEA4 188 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 FIBINQ8TAL6 211 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ALG14Q96F25 216 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 RUFY1Q96T51 708 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 WDR83Q9BRX9 315 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 BBS2Q9BXC9 721 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 S1PR5Q9H228 398 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PIH1D1Q9NWS0 290 aaKnown RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 GDE1Q9NZC3 331 aa15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 UBA2Q9UBT2 640 aaPredicted RBP15.01□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DOCK8Q8NF50 2099 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ERI2A8K979 691 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 NEDD8-MDP1E9PL57 170 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SLC9A3R1O14745 358 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 USP12O75317 370 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ANXA9O76027 345 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ELK3P41970 407 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ARF5P84085 180 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TNK2Q07912 1038 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LMAN2Q12907 356 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ADGRE1Q14246 886 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ZNF235Q14590 738 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LY6G5CQ5SRR4 150 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 APCDD1Q8J025 514 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PYROXD1Q8WU10 500 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 OTUB2Q96DC9 234 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SLC25A51Q9H1U9 297 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 XAB2Q9HCS7 855 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DUS2Q9NX74 493 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 KIAA1522Q9P206 1035 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CHMP2BQ9UQN3 213 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 AAR2Q9Y312 384 aaKnown RBP15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 NFS1Q9Y697 457 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SZT2Q5T011 3432 aa15□□□□□ -0.01
CDK5RAP3-201ENST00000338399 A0A1W2PPC1 479 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TTC24A2A3L6 582 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 GOLGA6CA6NDK9 693 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PSMD3O43242 534 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 ZMPSTE24O75844 475 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SUN1O94901 812 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PENKP01210 267 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SHBGP04278 402 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 GOLGA6DP0CG33 693 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 IGFBP4P22692 258 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CD70P32970 193 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MAGEA3P43357 314 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DSC2Q02487 901 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 NIPAL4Q0D2K0 466 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CTC1Q2NKJ3 1217 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LRRC8BQ6P9F7 803 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LINGO4Q6UY18 593 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CAPN12Q6ZSI9 719 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 IGDCC3Q8IVU1 814 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 BPIFB1Q8TDL5 484 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TTC25Q96NG3 672 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LRRC4CQ9HCJ2 640 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 GOLGA6AQ9NYA3 693 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TEX264Q9Y6I9 313 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MIA3Q5JRA6 1907 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 C5orf42Q9H799 3197 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MUSKO15146 869 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 NUDT17P0C025 328 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 MLNP12872 115 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TYRP14679 529 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 GEMP55040 296 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SESN2P58004 480 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CBLBQ13191 982 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 DNAJC21Q5F1R6 531 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TRIM68Q6AZZ1 485 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LRIG3Q6UXM1 1119 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PRPF39Q86UA1 669 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 KLHDC8BQ8IXV7 354 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 BBS5Q8N3I7 341 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 OR52K1Q8NGK4 314 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 OSCP1Q8WVF1 389 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 IMP4Q96G21 291 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 APOL2Q9BQE5 337 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LRRC40Q9H9A6 602 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 SEPT3Q9UH03 358 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 VPS51Q9UID3 782 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CDH7Q9ULB5 785 aa14.99□□□□□ -0.01
CDK5RAP3-201ENST00000338399 TMEM265A0A087WTH1 108 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 HEPACAM2A8MVW5 462 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 PMPCBO75439 489 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 CD160O95971 181 aa14.98□□□□□ -0.01
CDK5RAP3-201ENST00000338399 LTBRP36941 435 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms