RNA–Protein interactions for RNA: ENST00000336119.7

NLRP3-201, Transcript of NLR family pyrin domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRP3, Length 4,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-201ENST00000336119 LNPEPQ9UIQ6 1025 aa9.41□□□□□ -0.9
NLRP3-201ENST00000336119 TRAFD1O14545 582 aaPredicted RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 SPTLC1O15269 473 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 GJA5P36382 358 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 HK2P52789 917 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 OXCT1P55809 520 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 RAB10P61026 200 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 MOGSQ13724 837 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 LIPMQ5VYY2 423 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 HFE2Q6ZVN8 426 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 EFL1Q7Z2Z2 1120 aaKnown RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 SEPT8Q92599 483 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 PBXIP1Q96AQ6 731 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 OLFM3Q96PB7 478 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 GCNAQ96QF7 691 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 ZBTB18Q99592 522 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 DENND2DQ9H6A0 471 aaPredicted RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 IL1RAPL1Q9NZN1 696 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 SF3B1O75533 1304 aaKnown RBP eCLIP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 SUPT3HB4E1H0 165 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 STX7O15400 261 aaKnown RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 SUPT3HO75486 399 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 KRT36O76013 467 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 PFKMP08237 780 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 TPBGLP0DKB5 382 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 COL6A2P12110 1019 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 GRIA4P48058 902 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 ALDH7A1P49419 539 aaKnown RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 PSEN1P49768 467 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 FLT3LGP49771 235 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 WNT3AP56704 352 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 SLC25A3Q00325 362 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 PDE1CQ14123 709 aaPredicted RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 OTOP3Q7RTS5 596 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 LCA5Q86VQ0 697 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 KCTD4Q8WVF5 259 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 TMEM106CQ9BVX2 250 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 UNKQ9C0B0 810 aaKnown RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 CAB39LQ9H9S4 337 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 TMEM216Q9P0N5 145 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 MRPL42Q9Y6G3 142 aaKnown RBP9.4□□□□□ -0.9
NLRP3-201ENST00000336119 LTBP1Q14766 1721 aa9.4□□□□□ -0.9
NLRP3-201ENST00000336119 SOAT2O75908 522 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 SRP72O76094 671 aaKnown RBP9.4□□□□□ -0.91
NLRP3-201ENST00000336119 OAS1P00973 400 aaKnown RBP9.4□□□□□ -0.91
NLRP3-201ENST00000336119 ATP5F1P24539 256 aaPredicted RBP9.4□□□□□ -0.91
NLRP3-201ENST00000336119 TKTP29401 623 aaKnown RBP9.4□□□□□ -0.91
NLRP3-201ENST00000336119 ALDH1A3P47895 512 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 CLCN5P51795 746 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 CTBP1Q13363 440 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 MSLNQ13421 630 aaPredicted RBP9.4□□□□□ -0.91
NLRP3-201ENST00000336119 IRF5Q13568 498 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 RBBP5Q15291 538 aaKnown RBP9.4□□□□□ -0.91
NLRP3-201ENST00000336119 STXBP5Q5T5C0 1151 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 FSTL4Q6MZW2 842 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.4□□□□□ -0.91
NLRP3-201ENST00000336119 PTCD2Q8WV60 388 aaKnown RBP9.4□□□□□ -0.91
NLRP3-201ENST00000336119 SDCCAG3Q96C92 435 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 FGD4Q96M96 766 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 CATSPER2Q96P56 530 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 CADM1Q9BY67 442 aaKnown RBP9.4□□□□□ -0.91
NLRP3-201ENST00000336119 TRIM17Q9Y577 477 aa9.4□□□□□ -0.91
NLRP3-201ENST00000336119 NRP1O14786 923 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 MAGEC1O60732 1142 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 DNAJC6O75061 913 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 SNUPNO95149 360 aaKnown RBP9.39□□□□□ -0.91
NLRP3-201ENST00000336119 POLD2P49005 469 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 RABGGTBP53611 331 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 SLC5A3P53794 718 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 SLC10A2Q12908 348 aaPredicted RBP9.39□□□□□ -0.91
NLRP3-201ENST00000336119 ACCSLQ4AC99 568 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 CYS1Q717R9 158 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 PIWIL4Q7Z3Z4 852 aaKnown RBP9.39□□□□□ -0.91
NLRP3-201ENST00000336119 SNX32Q86XE0 403 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 KBTBD7Q8WVZ9 684 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 MRPL57Q9BQC6 102 aaKnown RBP9.39□□□□□ -0.91
NLRP3-201ENST00000336119 POLR1EQ9GZS1 481 aaKnown RBP9.39□□□□□ -0.91
NLRP3-201ENST00000336119 CDH19Q9H159 772 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 TAS2R1Q9NYW7 299 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 TRPM5Q9NZQ8 1165 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 GTF2IRD1Q9UHL9 959 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 MCM8Q9UJA3 840 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 SNX10Q9Y5X0 201 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 UBDO15205 165 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 BNIP3LO60238 219 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 ASGR1P07306 291 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 VAV1P15498 845 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 TYMPP19971 482 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 XPAP23025 273 aaPredicted RBP9.39□□□□□ -0.91
NLRP3-201ENST00000336119 CD86P42081 329 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 PURAQ00577 322 aaKnown RBP9.39□□□□□ -0.91
NLRP3-201ENST00000336119 POU4F1Q01851 419 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 RAD51Q06609 339 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 SOX4Q06945 474 aaPredicted RBP9.39□□□□□ -0.91
NLRP3-201ENST00000336119 RBBP7Q16576 425 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 SPRED3Q2MJR0 410 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 MARCH8Q5T0T0 291 aa9.39□□□□□ -0.91
NLRP3-201ENST00000336119 IZUMO2Q6UXV1 221 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms