RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 B3GALNT2Q8NCR0 500 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 JADE3Q92613 823 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 STN1Q9H668 368 aaKnown RBP16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 PIGVQ9NUD9 493 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 DNAJC28Q9NX36 388 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 ADA2Q9NZK5 511 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 DYNC1LI2O43237 492 aaPredicted RBP16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 NFKB1P19838 968 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 ARHGAP17Q68EM7 881 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 LRRC52Q8N7C0 313 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 RNF169Q8NCN4 708 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 RIN3Q8TB24 985 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 VPS39Q96JC1 886 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 ACE2Q9BYF1 805 aaPredicted RBP16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 GTSE1Q9NYZ3 720 aa16.79■□□□□ 0.28
CDC42EP4-201ENST00000335793 A0A0G2JLL6 359 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 SMIM28A0A1B0GU29 152 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 DFFAO00273 331 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 CD4P01730 458 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 THRAP10827 490 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 CYP2C9P11712 490 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 MYL4P12829 197 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 GRIA4P48058 902 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 C16orf72Q14CZ0 275 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 INSCQ1MX18 579 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 STEAP4Q687X5 459 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 TWF2Q6IBS0 349 aaKnown RBP16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 ACTRT2Q8TDY3 377 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 WNT8BQ93098 351 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 SNX27Q96L92 541 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 SYT17Q9BSW7 474 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 ULBP1Q9BZM6 244 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 PLEKHA5Q9HAU0 1116 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 PCDHB12Q9Y5F1 795 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 UQCRBP14927 111 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 SLC12A2P55011 1212 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 POU6F1Q14863 301 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 GPR162Q16538 588 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 IYDQ6PHW0 289 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 KYQ8NBH2 561 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 ACVR1CQ8NER5 493 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 CNBD2Q96M20 576 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 AK5Q9Y6K8 562 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 USP17L7P0C7H9 530 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 PTPN3P26045 913 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 CD97P48960 835 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 LIMK2P53671 638 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 CDK18Q07002 472 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 PPIDQ08752 370 aaKnown RBP16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 SEPT6Q14141 434 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 PRPSAP1Q14558 356 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 PDK3Q15120 406 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 WSCD1Q658N2 575 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 KLHDC10Q6PID8 442 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 PDSS2Q86YH6 399 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 IPMKQ8NFU5 416 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 DNAJB3Q8WWF6 145 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 LZICQ8WZA0 190 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 CENPIQ92674 756 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 ATXN3LQ9H3M9 355 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 COPS7BQ9H9Q2 264 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 CIDEBQ9UHD4 219 aa16.78■□□□□ 0.28
CDC42EP4-201ENST00000335793 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 TIMM44O43615 452 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 CCNT2O60583 730 aaKnown RBP16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 HOXA11P31270 313 aaPredicted RBP16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 ALDH1A3P47895 512 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 FOLH1Q04609 750 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 ZNF460Q14592 562 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 ARL13BQ3SXY8 428 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 ARL13AQ5H913 290 aaPredicted RBP16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 B3GNT6Q6ZMB0 384 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 GIPC3Q8TF64 312 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 KCTD4Q8WVF5 259 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 GAB3Q8WWW8 586 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 RCN3Q96D15 328 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 DNAJB4Q9UDY4 337 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 APPL1Q9UKG1 709 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 PSME4Q14997 1843 aa16.77■□□□□ 0.28
CDC42EP4-201ENST00000335793 PIK3R1P27986 724 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 ADRA1BP35368 520 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 TUFMP49411 452 aaKnown RBP16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 TSPY1Q01534 308 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 CTBP1Q13363 440 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 GRM3Q14832 879 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 STXBP5Q5T5C0 1151 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 IL31Q6EBC2 164 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 TMC7Q7Z402 723 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 SIX5Q8N196 739 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 KBTBD7Q8WVZ9 684 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 NUP205Q92621 2012 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 DOCK1Q14185 1865 aa16.77■□□□□ 0.27
CDC42EP4-201ENST00000335793 CXCL11O14625 94 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 STAU1O95793 577 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 PABPC4LP0CB38 370 aaKnown RBP16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 CD1EP15812 388 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 NPR3P17342 541 aa16.76■□□□□ 0.27
CDC42EP4-201ENST00000335793 NMBRP28336 390 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms