RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 DNAAF3Q8N9W5 541 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
LMO1-201ENST00000335790 SPATA22Q8NHS9 363 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 USP33Q8TEY7 942 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 DYDC1Q8WWB3 177 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 ISL2Q96A47 359 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 ZFRQ96KR1 1074 aaKnown RBP13.72□□□□□ -0.21
LMO1-201ENST00000335790 MRGPRX2Q96LB1 330 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 FCRL3Q96P31 734 aaPredicted RBP13.72□□□□□ -0.21
LMO1-201ENST00000335790 DDX50Q9BQ39 737 aaKnown RBP13.72□□□□□ -0.21
LMO1-201ENST00000335790 COL25A1Q9BXS0 654 aaPredicted RBP13.72□□□□□ -0.21
LMO1-201ENST00000335790 RNF38Q9H0F5 515 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 NSRP1Q9H0G5 558 aaKnown RBP13.72□□□□□ -0.21
LMO1-201ENST00000335790 VPS11Q9H270 941 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 PRKAG3Q9UGI9 489 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 INSL6Q9Y581 213 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 RPS6KL1Q9Y6S9 549 aa13.72□□□□□ -0.21
LMO1-201ENST00000335790 HELZP42694 1942 aaKnown RBP13.71□□□□□ -0.21
LMO1-201ENST00000335790 J3KR12 359 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 PRRG1O14668 218 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 UGT1A9O60656 530 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 CNPP09543 421 aaKnown RBP13.71□□□□□ -0.21
LMO1-201ENST00000335790 PFKLP17858 780 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 HOXD9P28356 352 aaPredicted RBP13.71□□□□□ -0.21
LMO1-201ENST00000335790 SLC10A7Q0GE19 358 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 TAF12Q16514 161 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 PCID2Q5JVF3 399 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 TMEM240Q5SV17 173 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 CERCAMQ5T4B2 595 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 STXBP5Q5T5C0 1151 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 ADGRF1Q5T601 910 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 GRTP1Q5TC63 336 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 GKAP1Q5VSY0 366 aaPredicted RBP13.71□□□□□ -0.21
LMO1-201ENST00000335790 PACS1Q6VY07 963 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 ZNF783Q6ZMS7 281 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 OTOP2Q7RTS6 562 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 YTHDF3Q7Z739 585 aaKnown RBP13.71□□□□□ -0.21
LMO1-201ENST00000335790 CPLX4Q7Z7G2 160 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 SETD3Q86TU7 594 aaPredicted RBP13.71□□□□□ -0.21
LMO1-201ENST00000335790 FAM217AQ8IXS0 508 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 PHOSPHO2Q8TCD6 241 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 MGARPQ8TDB4 240 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 NSMCE1Q8WV22 266 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 GRAMD1AQ96CP6 724 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 SEC16BQ96JE7 1060 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 RANBP9Q96S59 729 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 CPNE1Q99829 537 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 MCMBPQ9BTE3 642 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 LRRC3Q9BY71 257 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 RABEP2Q9H5N1 569 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 UGT1A7Q9HAW7 530 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 UGT1A10Q9HAW8 530 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 UGT1A8Q9HAW9 530 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 SP110Q9HB58 689 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 ZNF334Q9HCZ1 680 aaPredicted RBP13.71□□□□□ -0.21
LMO1-201ENST00000335790 TBC1D30Q9Y2I9 924 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 CUL9Q8IWT3 2517 aa13.71□□□□□ -0.21
LMO1-201ENST00000335790 ILVBLA1L0T0 632 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 C2orf78A6NCI8 922 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 TCP11X1B4DZS4 312 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 GREM1O60565 184 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 MT-CYBP00156 380 aaPredicted RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 MMP2P08253 660 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 OR1E1P30953 314 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 CORO1AP31146 461 aaKnown RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 FOXN2P32314 431 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 GP5P40197 560 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 MAGEA12P43365 314 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 CSE1LP55060 971 aaKnown RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 GNA12Q03113 381 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 PPARDQ03181 441 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 FPGSQ05932 587 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 MSLNQ13421 630 aaPredicted RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 ITIH4Q14624 930 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 TMCO4Q5TGY1 634 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 PKN3Q6P5Z2 889 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 PSRC1Q6PGN9 363 aaPredicted RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 LVRNQ6Q4G3 990 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 Q6ZNB5 142 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 CCDC149Q6ZUS6 474 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 MICALCLQ6ZW33 695 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 C7orf61Q8IZ16 206 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 UNC5BQ8IZJ1 945 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 ARRDC2Q8TBH0 407 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 TCP10LQ8TDR4 215 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 AUTS2Q8WXX7 1259 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 HERVK_113Q902F9 699 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 ZNF669Q96BR6 464 aaPredicted RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 PRICKLE1Q96MT3 831 aaPredicted RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 NACA2Q9H009 215 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 PIH1D1Q9NWS0 290 aaKnown RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 NSMCE4AQ9NXX6 385 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 AGO1Q9UL18 857 aaKnown RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 GRID1Q9ULK0 1009 aa13.7□□□□□ -0.22
LMO1-201ENST00000335790 ZFP37Q9Y6Q3 630 aaPredicted RBP13.7□□□□□ -0.22
LMO1-201ENST00000335790 A0A1B0GVM2 712 aa13.69□□□□□ -0.22
LMO1-201ENST00000335790 TCAF2A6NFQ2 919 aa13.69□□□□□ -0.22
LMO1-201ENST00000335790 TGM5O43548 720 aa13.69□□□□□ -0.22
LMO1-201ENST00000335790 SNX3O60493 162 aa13.69□□□□□ -0.22
LMO1-201ENST00000335790 LPXNO60711 386 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms