RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IER5Q5VY09 327 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 ALKBH2Q6NS38 261 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TMEM110Q86TL2 294 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 LPCAT1Q8NF37 534 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CGRRF1Q99675 332 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 MED28Q9H204 178 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 MARCH7Q9H992 704 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 CCNB1IP1Q9NPC3 277 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 DHRS7Q9Y394 339 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 TRIM17Q9Y577 477 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 PCDHA11Q9Y5I1 949 aa9.93□□□□□ -0.82
COL4A6-201ENST00000334504 G3V2T6 193 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PDE2AO00408 941 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 MSH4O15457 936 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 MGRN1O60291 552 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 AKAP3O75969 853 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 TOP3BO95985 862 aaKnown RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 RLN1P04808 185 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 LYNP07948 512 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PNPLA4P41247 253 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 ATN1P54259 1190 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 USP4Q13107 963 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 MADCAM1Q13477 382 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 SULT1C3Q6IMI6 304 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 ZNF549Q6P9A3 640 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 SATL1Q86VE3 508 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 GRPEL2Q8TAA5 225 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 TAS1R2Q8TE23 839 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 KBTBD7Q8WVZ9 684 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 MASTLQ96GX5 879 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 MFSD1Q9H3U5 465 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 KLK14Q9P0G3 267 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 CIDEBQ9UHD4 219 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 CAPN8A6NHC0 703 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 HMGB3O15347 200 aaKnown RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 CELF2O95319 508 aaKnown RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 NDUFB10O96000 172 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 IFI30P13284 250 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 FMO4P31512 558 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 RAB2AP61019 212 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 MTMR2Q13614 643 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 BLMHQ13867 455 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 SMCO1Q147U7 214 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PAN2Q504Q3 1202 aaKnown RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 SBK1Q52WX2 424 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 ZC3H7AQ8IWR0 971 aaKnown RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 BBS4Q96RK4 519 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 NOL11Q9H8H0 719 aaKnown RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 RBM22Q9NW64 420 aaKnown RBP eCLIP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PRKAB1Q9Y478 270 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 USP6P35125 1406 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 DYRK3O43781 588 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 TIPRLO75663 272 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 CYP2C9P11712 490 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 CYP4F8P98187 520 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 RIPK1Q13546 671 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 CA9Q16790 459 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 IQCF2Q8IXL9 164 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PQLC1Q8N2U9 271 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 DAGLBQ8NCG7 672 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 LSM14AQ8ND56 463 aaKnown RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 ADGRE3Q9BY15 652 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 SENP6Q9GZR1 1112 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 IGFLR1Q9H665 355 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 FBXO6Q9NRD1 293 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 LEF1Q9UJU2 399 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PRR12Q9ULL5 1215 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 CLEC4AQ9UMR7 237 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PCDHGA10Q9Y5H3 936 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 ACTL7BQ9Y614 415 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 POLR1AO95602 1720 aaPredicted RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 CHURC1-FNTBB4DL54 471 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 CASKO14936 926 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PEX11AO75192 247 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 SPIBQ01892 262 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 TGM3Q08188 693 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 BST1Q10588 318 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 HKDC1Q2TB90 917 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 AADATQ8N5Z0 425 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 FAM13CQ8NE31 585 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 ELMO3Q96BJ8 720 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 C1QTNF1Q9BXJ1 281 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 KCNH7Q9NS40 1196 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 DNAAF2Q9NVR5 837 aaKnown RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 TAS2R13Q9NYV9 303 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 E7ENX8 843 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 BANF1O75531 89 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 OR1G1P47890 313 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 GRIA4P48058 902 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 MAZP56270 477 aaKnown RBP9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PHC1P78364 1004 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 PPATQ06203 517 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 ATP13A5Q4VNC0 1218 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 TNFAIP8L3Q5GJ75 292 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 RNF44Q7L0R7 432 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 ABRAQ8N0Z2 381 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 MREGQ8N565 214 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 OR52L1Q8NGH7 329 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 ELMO1Q92556 727 aa9.92□□□□□ -0.82
COL4A6-201ENST00000334504 TAMM41Q96BW9 452 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms