RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 ANO4Q32M45 955 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 P3H1Q32P28 736 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 GALNTL6Q49A17 601 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 C2orf27AQ580R0 203 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 NUGGCQ68CJ6 796 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 LAIR1Q6GTX8 287 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 ERICH1Q86X53 443 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 MIB1Q86YT6 1006 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 ETFBKMTQ8IXQ9 262 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 PHTF2Q8N3S3 785 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 USP33Q8TEY7 942 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 MAML1Q92585 1016 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 NCAPGQ9BPX3 1015 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 FRMD8Q9BZ67 464 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 KCNK9Q9NPC2 374 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 ARHGEF4Q9NR80 690 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 SPHK2Q9NRA0 654 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 CLIC5Q9NZA1 410 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 HESX1Q9UBX0 185 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 DNMT3LQ9UJW3 386 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 STARD13Q9Y3M8 1113 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 CCDC163A0A0D9SF12 145 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 SIGLEC16A6NMB1 481 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 TCP11X1B4DZS4 312 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 RASA4BC9J798 803 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 NEDD8-MDP1E9PL57 170 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 RASA4O43374 803 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 TULP3O75386 442 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 RPP40O75818 363 aaKnown RBP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 STC2O76061 302 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 APODP05090 189 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 SETSIPP0DME0 302 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 CHRM1P11229 460 aaPredicted RBP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 VDRP11473 427 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 EZRP15311 586 aaKnown RBP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 SSR1P43307 286 aaKnown RBP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 ARSEP51690 589 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 YWHAGP61981 247 aaKnown RBP eCLIP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 EFEMP1Q12805 493 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 SPARCL1Q14515 664 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 TAZQ16635 292 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 BTBD8Q5XKL5 378 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 HTR3DQ70Z44 454 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 CEP68Q76N32 757 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 BHLHA9Q7RTU4 235 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 TRABD2AQ86V40 505 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 TMEM25Q86YD3 366 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 CAMKK1Q8N5S9 505 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 NAT16Q8N8M0 369 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 UHMK1Q8TAS1 419 aaKnown RBP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 SLC35B2Q8TB61 432 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 ZNF398Q8TD17 642 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 GAB3Q8WWW8 586 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 TFAP2BQ92481 460 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 ALKBH8Q96BT7 664 aaKnown RBP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 CDK5RAP1Q96SZ6 601 aaKnown RBP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 HERPUD2Q9BSE4 406 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 HEMGNQ9BXL5 484 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 ULBP1Q9BZM6 244 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 ZDHHC4Q9NPG8 344 aa11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.35□□□□□ -0.59
APOBEC3B-201ENST00000333467 CKAP5Q14008 2032 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 CEP250Q9BV73 2442 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 M0QYV0 167 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 HNRNPCL1O60812 293 aaKnown RBP11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 SPAG6O75602 509 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 APBB3O95704 486 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 ZBED1O96006 694 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 CALCAP01258 141 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 BRD2P25440 801 aaKnown RBP11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 CDKN2BP42772 138 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 BNIP1Q12981 228 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 KLHL38Q2WGJ6 581 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 PREPLQ4J6C6 727 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 PKDCCQ504Y2 493 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 ZFYVE27Q5T4F4 411 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 WLSQ5T9L3 541 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 RNASEH2BQ5TBB1 312 aaKnown RBP11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 MFSD7Q6UXD7 560 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 Q6ZNB5 142 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 TPGS1Q6ZTW0 290 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 BBS12Q6ZW61 710 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 VSIG1Q86XK7 387 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 PASD1Q8IV76 773 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 PPIL6Q8IXY8 311 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 SIX6OS1Q8N1H7 587 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 ARHGAP18Q8N392 663 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 CCDC33Q8N5R6 958 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 FAM160A2Q8N612 972 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 PDCD7Q8N8D1 485 aaKnown RBP11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 TERB1Q8NA31 727 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 ATP11CQ8NB49 1132 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 TSTD1Q8NFU3 115 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 UBA3Q8TBC4 463 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 FBF1Q8TES7 1133 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 NDRG1Q92597 394 aaKnown RBP11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 SMC6Q96SB8 1091 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 BBS2Q9BXC9 721 aa11.34□□□□□ -0.59
APOBEC3B-201ENST00000333467 LRRC4Q9HBW1 653 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms