RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 COLGALT2Q8IYK4 626 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 OR6Y1Q8NGX8 325 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 GIMAP7Q8NHV1 300 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 ZNF570Q96NI8 536 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 SERPINB11Q96P15 392 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 SIKE1Q9BRV8 207 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 FTHL17Q9BXU8 183 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 TBC1D13Q9NVG8 400 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 AP3B1O00203 1094 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 OAZ2O95190 189 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 AHSGP02765 367 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 CHRNA4P43681 627 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 HARS2P49590 506 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 IDH3AP50213 366 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 CDK7P50613 346 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 CTBP1Q13363 440 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 ANO4Q32M45 955 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 TRAF7Q6Q0C0 670 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 AGR3Q8TD06 166 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 N4BP2L2Q92802 583 aaPredicted RBP15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 B3GALT6Q96L58 329 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 GPR22Q99680 433 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 FSD1LQ9BXM9 530 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 GMIPQ9P107 970 aa15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 APOBEC2Q9Y235 224 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-201ENST00000331433 MEI4A8MW99 385 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 SPECC1L-ADORA2AF8WAN1 911 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 TK2O00142 265 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 ZNF195O14628 629 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 SOAT2O75908 522 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 TBX18O95935 607 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 ARNTP27540 789 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 HTR7P34969 479 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 ADRA1AP35348 466 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 GLRBP48167 497 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 MLLT6P55198 1093 aaPredicted RBP15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 ZNF460Q14592 562 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 USP10Q14694 798 aaKnown RBP15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 PCSK7Q16549 785 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 AFMIDQ63HM1 303 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 TMPRSS6Q8IU80 811 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 NUP93Q8N1F7 819 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 ZNF781Q8N8C0 355 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 ATAD1Q8NBU5 361 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 CLPTM1LQ96KA5 538 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 FAM161BQ96MY7 647 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 RHOJQ9H4E5 214 aa15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 NOL6Q9H6R4 1146 aaKnown RBP15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 IPO11Q9UI26 975 aaKnown RBP15.08■□□□□ 0.01
CLCNKA-201ENST00000331433 THSD7BQ9C0I4 1608 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 FRMPD3Q5JV73 1810 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 SIN3BO75182 1162 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 KRT36O76013 467 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 NEBLO76041 1014 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 GEMP55040 296 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 VARS2Q5ST30 1063 aaKnown RBP15.08■□□□□ 0
CLCNKA-201ENST00000331433 RNF180Q86T96 592 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 MON1AQ86VX9 555 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 SLC41A1Q8IVJ1 513 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 DCP1BQ8IZD4 617 aaKnown RBP15.08■□□□□ 0
CLCNKA-201ENST00000331433 MRGPRX2Q96LB1 330 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 MMADHCQ9H3L0 296 aaPredicted RBP15.08■□□□□ 0
CLCNKA-201ENST00000331433 TASP1Q9H6P5 420 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 SCML2Q9UQR0 700 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 PCDHB12Q9Y5F1 795 aa15.08■□□□□ 0
CLCNKA-201ENST00000331433 HSPA4LO95757 839 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 EOMESO95936 686 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 ATP5BP06576 529 aaKnown RBP15.07■□□□□ 0
CLCNKA-201ENST00000331433 DNAJB2P25686 324 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 ARCN1P48444 511 aaKnown RBP15.07■□□□□ 0
CLCNKA-201ENST00000331433 PTDSS1P48651 473 aaKnown RBP15.07■□□□□ 0
CLCNKA-201ENST00000331433 SESN3P58005 492 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 EFEMP1Q12805 493 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 SEPT6Q14141 434 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 CNGA3Q16281 694 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 POU5F2Q8N7G0 328 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 PPHLN1Q8NEY8 458 aaKnown RBP15.07■□□□□ 0
CLCNKA-201ENST00000331433 RSRC1Q96IZ7 334 aaKnown RBP15.07■□□□□ 0
CLCNKA-201ENST00000331433 C1QTNF1Q9BXJ1 281 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 ACE2Q9BYF1 805 aaPredicted RBP15.07■□□□□ 0
CLCNKA-201ENST00000331433 UNKQ9C0B0 810 aaKnown RBP15.07■□□□□ 0
CLCNKA-201ENST00000331433 DCLRE1BQ9H816 532 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 DNAJC28Q9NX36 388 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 TLK1Q9UKI8 766 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 PLA2G4CQ9UP65 541 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 TLR6Q9Y2C9 796 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 TCAF1Q9Y4C2 921 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 VWA8A3KMH1 1905 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 TADA2AO75478 443 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 CNTN5O94779 1100 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 SLC35E2BP0CK96 405 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 AOC1P19801 751 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 NUMBP49757 651 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 CSRP3P50461 194 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 CCNG1P51959 295 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 ARPP19P56211 112 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 MXRA7P84157 204 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 RCN1Q15293 331 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 TBCCQ15814 346 aa15.07■□□□□ 0
CLCNKA-201ENST00000331433 TIGD7Q6NT04 549 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms