RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PPP1R36Q96LQ0 422 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 TSNARE1Q96NA8 513 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 GPR22Q99680 433 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 APBA2Q99767 749 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 TRIM4Q9C037 500 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 ACSS2Q9NR19 701 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 DDIT4Q9NX09 232 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 STK39Q9UEW8 545 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 PRPF19Q9UMS4 504 aaKnown RBP15.62■□□□□ 0.09
BRCC3-201ENST00000330045 IPPQ9Y573 584 aa15.62■□□□□ 0.09
BRCC3-201ENST00000330045 GABRDO14764 452 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 PEX1O43933 1283 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 CD1EP15812 388 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 EPHA3P29320 983 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 CDH17Q12864 832 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 DLG1Q12959 904 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 C11orf91Q3C1V1 193 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 LSM12Q3MHD2 195 aaKnown RBP15.61■□□□□ 0.09
BRCC3-201ENST00000330045 MMEL1Q495T6 779 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 LIN52Q52LA3 116 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 C16orf89Q6UX73 402 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 TLK2Q86UE8 772 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 SNX32Q86XE0 403 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 TMEM151AQ8N4L1 468 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 TEKT5Q96M29 485 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 SERPINI1Q99574 410 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 CENPKQ9BS16 269 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 C1QTNF1Q9BXJ1 281 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 NSMCE4AQ9NXX6 385 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 MBLAC1A4D2B0 266 aaPredicted RBP15.61■□□□□ 0.09
BRCC3-201ENST00000330045 CABYRO75952 493 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 PIGNO95427 931 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 JCHAINP01591 159 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 CSRP3P50461 194 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 HK2P52789 917 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 PRKAA2P54646 552 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 PRPSAP1Q14558 356 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 USP10Q14694 798 aaKnown RBP15.61■□□□□ 0.09
BRCC3-201ENST00000330045 PPP2R5DQ14738 602 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 GRAMD1BQ3KR37 738 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 ARL13AQ5H913 290 aaPredicted RBP15.61■□□□□ 0.09
BRCC3-201ENST00000330045 NAPEPLDQ6IQ20 393 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 ZC3HC1Q86WB0 502 aaKnown RBP15.61■□□□□ 0.09
BRCC3-201ENST00000330045 KYQ8NBH2 561 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 ICA1LQ8NDH6 482 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 RP9Q8TA86 221 aaKnown RBP15.61■□□□□ 0.09
BRCC3-201ENST00000330045 PGAP3Q96FM1 320 aaPredicted RBP15.61■□□□□ 0.09
BRCC3-201ENST00000330045 SCYL1Q96KG9 808 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 CNGB3Q9NQW8 809 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 PACSIN3Q9UKS6 424 aa15.61■□□□□ 0.09
BRCC3-201ENST00000330045 G3BP2Q9UN86 482 aaKnown RBP15.61■□□□□ 0.09
BRCC3-201ENST00000330045 CCDC78A2IDD5 438 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 MYADML2A6NDP7 307 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 AP3B1O00203 1094 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 TNPO2O14787 897 aaKnown RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 PHGDHO43175 533 aaKnown RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 AP1G2O75843 785 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 SBK3P0C264 359 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 USP17L7P0C7H9 530 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 PIM1P11309 404 aaPredicted RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 TFEBP19484 476 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 IGFBP6P24592 240 aaPredicted RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 LRPAP1P30533 357 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 CCR10P46092 362 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 NAGLUP54802 743 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 PPM1LQ5SGD2 360 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 GPRIN1Q7Z2K8 1008 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 SDCCAG8Q86SQ7 713 aaPredicted RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 DSELQ8IZU8 1212 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 SMG8Q8ND04 991 aaKnown RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 EPAS1Q99814 870 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 COLEC11Q9BWP8 271 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 NUF2Q9BZD4 464 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 RHOJQ9H4E5 214 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 WDCPQ9H6R7 721 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 CRTAC1Q9NQ79 661 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 OR12D3Q9UGF7 316 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 PSMD13Q9UNM6 376 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 RUVBL2Q9Y230 463 aaKnown RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 SNX10Q9Y5X0 201 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 TLL2Q9Y6L7 1015 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 CLGNO14967 610 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 GRID2O43424 1007 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 FAM163BP0C2L3 166 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 GLRBP48167 497 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 PGGT1BP53609 377 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 RPL26P61254 145 aaKnown RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 PRKAA1Q13131 559 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 CYLC2Q14093 348 aaPredicted RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 OGFRL1Q5TC84 451 aaPredicted RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 TMC7Q7Z402 723 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 TRPV1Q8NER1 839 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 BTBD9Q96Q07 612 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 SMOQ99835 787 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 KIFC1Q9BW19 673 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 SPATA16Q9BXB7 569 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 C6orf203Q9P0P8 240 aaPredicted RBP15.6■□□□□ 0.09
BRCC3-201ENST00000330045 ZDHHC2Q9UIJ5 367 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 GABRQQ9UN88 632 aa15.6■□□□□ 0.09
BRCC3-201ENST00000330045 INPP5FQ9Y2H2 1132 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms