RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PLXNA4Q9HCM2 1894 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 C2orf78A6NCI8 922 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 FGF18O76093 207 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 DHRS4L1P0CG22 281 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 CORO1AP31146 461 aaKnown RBP15.18■□□□□ 0.02
TPM3-205ENST00000328159 ACVRL1P37023 503 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 ITIH4Q14624 930 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 SMAD1Q15797 465 aaKnown RBP15.18■□□□□ 0.02
TPM3-205ENST00000328159 PCID2Q5JVF3 399 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 RABGAP1LQ5R372 815 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 KDELC1Q6UW63 502 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 C16orf59Q7L2K0 433 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 SRLQ86TD4 932 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 MFSD3Q96ES6 412 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 FAM111AQ96PZ2 611 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 SRPK1Q96SB4 655 aaKnown RBP15.18■□□□□ 0.02
TPM3-205ENST00000328159 CPNE1Q99829 537 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 FSD1LQ9BXM9 530 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 IQCGQ9H095 443 aaKnown RBP15.18■□□□□ 0.02
TPM3-205ENST00000328159 RNF38Q9H0F5 515 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 ZBP1Q9H171 429 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 VPS11Q9H270 941 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 GKN1Q9NS71 199 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 STK39Q9UEW8 545 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 ZFP37Q9Y6Q3 630 aaPredicted RBP15.18■□□□□ 0.02
TPM3-205ENST00000328159 MYLKQ15746 1914 aa15.18■□□□□ 0.02
TPM3-205ENST00000328159 OBSL1O75147 1896 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 PRAMEF11O60813 436 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 KIAA0754O94854 1291 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 KLKB1P03952 638 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 IRF1P10914 325 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 NMBRP28336 390 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 GP5P40197 560 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 ETV4P43268 484 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 LBX1P52954 281 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 CDH4P55283 916 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 WNT3AP56704 352 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 ITKQ08881 620 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 SF3A3Q12874 501 aaKnown RBP eCLIP15.17■□□□□ 0.02
TPM3-205ENST00000328159 FAM47EQ6ZV65 393 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 TMEM150AQ86TG1 271 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 CCDC117Q8IWD4 279 aaPredicted RBP15.17■□□□□ 0.02
TPM3-205ENST00000328159 CNPY4Q8N129 248 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 FIBCD1Q8N539 461 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 ANKS4BQ8N8V4 417 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 ZNF75CPQ92670 426 aaPredicted RBP15.17■□□□□ 0.02
TPM3-205ENST00000328159 PITPNM3Q9BZ71 974 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 ZNF334Q9HCZ1 680 aaPredicted RBP15.17■□□□□ 0.02
TPM3-205ENST00000328159 TXNDC16Q9P2K2 825 aa15.17■□□□□ 0.02
TPM3-205ENST00000328159 H3BNC9 293 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 FGBP02675 491 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 CTSAP10619 480 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 CA8P35219 290 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 MAXP61244 160 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 HTRA4P83105 476 aaPredicted RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 DSC2Q02487 901 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 LBRQ14739 615 aaKnown RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 TEDDM1Q5T9Z0 273 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 GRTP1Q5TC63 336 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 PKN3Q6P5Z2 889 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 RANBP10Q6VN20 620 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 CDHR3Q6ZTQ4 885 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 SPATA21Q7Z572 469 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 YTHDF3Q7Z739 585 aaKnown RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 ITIH5Q86UX2 942 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 KCNMB4Q86W47 210 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 DNAJC5GQ8N7S2 189 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 PPHLN1Q8NEY8 458 aaKnown RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 WBP2Q969T9 261 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 GRAMD1AQ96CP6 724 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 PRICKLE1Q96MT3 831 aaPredicted RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 MAGEH1Q9H213 219 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 C20orf96Q9NUD7 363 aaPredicted RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 PCMTD2Q9NV79 361 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 SSX2IPQ9Y2D8 614 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 PLLPQ9Y342 182 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 USP15Q9Y4E8 981 aaPredicted RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 WDR91A4D1P6 747 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 F11P03951 625 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 ITGA2BP08514 1039 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 CNPP09543 421 aaKnown RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 LINC00271P0C7V0 271 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 SPATA31D3P0C874 917 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 ETFBP38117 255 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 CD86P42081 329 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 RPS24P62847 133 aaKnown RBP15.16■□□□□ 0.02
TPM3-205ENST00000328159 GNA12Q03113 381 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 PPIGQ13427 754 aaKnown RBP eCLIP15.16■□□□□ 0.024e-7■□□□□ 9.5
TPM3-205ENST00000328159 POU6F1Q14863 301 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 PCSK7Q16549 785 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 HSP90AA5PQ58FG0 334 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 TMCO4Q5TGY1 634 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 CGB2Q6NT52 195 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 POTEHQ6S545 545 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 SPATA31D4Q6ZUB0 917 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 KDELC2Q7Z4H8 507 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 NDUFAF2Q8N183 169 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 PGBD5Q8N414 524 aa15.16■□□□□ 0.02
TPM3-205ENST00000328159 ACMSDQ8TDX5 336 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms