RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 TRPS1Q9UHF7 1281 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 SLC12A8A0AV02 714 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 VGLL3A8MV65 326 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 CYP2B6P20813 491 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 IL12AP29459 219 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 PCID2Q5JVF3 399 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 FBXL19Q6PCT2 694 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 ACOT12Q8WYK0 555 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 ATG4CQ96DT6 458 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 IDI2Q9BXS1 227 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 MSRAQ9UJ68 235 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 PRPF19Q9UMS4 504 aaKnown RBP12.77□□□□□ -0.36
FN1-201ENST00000323926 PCDHA11Q9Y5I1 949 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 CBX4O00257 560 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 TCF4P15884 667 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 SLC34A1Q06495 639 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 TMC8Q8IU68 726 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 HJURPQ8NCD3 748 aaPredicted RBP12.77□□□□□ -0.36
FN1-201ENST00000323926 ZNF606Q8WXB4 792 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 PCBD2Q9H0N5 130 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 C3orf14Q9HBI5 128 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 COMMD9Q9P000 198 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 COQ6Q9Y2Z9 468 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 ZDHHC9Q9Y397 364 aa12.77□□□□□ -0.36
FN1-201ENST00000323926 GRIN2DO15399 1336 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 UBE2QL1A1L167 161 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 OTCP00480 354 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 LTFP02788 710 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 CDC42P60953 191 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 R3HDM1Q15032 1099 aaKnown RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 LRRC36Q1X8D7 754 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 CXXC5Q7LFL8 322 aaKnown RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 TLK2Q86UE8 772 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 CCDC36Q8IYA8 594 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 CACTIN-AS1Q8N1I8 211 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 CASKIN2Q8WXE0 1202 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 CLCC1Q96S66 551 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 TMEM120AQ9BXJ8 343 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 SEMA3GQ9NS98 782 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 TBC1D14Q9P2M4 693 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 VPS4AQ9UN37 437 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 ERGIC3Q9Y282 383 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 ZNFX1Q9P2E3 1918 aaKnown RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 H3BN98 237 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 AP3S2P59780 193 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 EIF3MQ7L2H7 374 aaKnown RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 TSR3Q9UJK0 312 aaKnown RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 CYP3A7-CYP3A51PA0A087WV96 503 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 ETS1P14921 441 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 CYP3A7P24462 503 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 SCNN1BP51168 640 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 TMEM119Q4V9L6 283 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 THOC7Q6I9Y2 204 aaKnown RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 TRMT11Q7Z4G4 463 aaKnown RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 LINC00116Q8NCU8 138 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 SRFBP1Q8NEF9 429 aaKnown RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 USP33Q8TEY7 942 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 PIK3R5Q8WYR1 880 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 GPR101Q96P66 508 aaPredicted RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 H0YJX3 145 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 TRAFD1O14545 582 aaPredicted RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 TSPAN19P0C672 248 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 TCN1P20061 433 aaPredicted RBP12.77□□□□□ -0.37
FN1-201ENST00000323926 TUBP50607 506 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 SV2AQ7L0J3 742 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 PLPPR4Q7Z2D5 763 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 PJA1Q8NG27 643 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 SUSD6Q92537 303 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 OSGEPL1Q9H4B0 414 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 ASAH2Q9NR71 780 aa12.77□□□□□ -0.37
FN1-201ENST00000323926 BAIAP3O94812 1187 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 CSNK2BP67870 215 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 TMEM62Q0P6H9 643 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 FSCN1Q16658 493 aaKnown RBP12.76□□□□□ -0.37
FN1-201ENST00000323926 DEFB107AQ8IZN7 70 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 LEF1Q9UJU2 399 aaPredicted RBP12.76□□□□□ -0.37
FN1-201ENST00000323926 TRIP12Q14669 1992 aaPredicted RBP12.76□□□□□ -0.37
FN1-201ENST00000323926 PRMT5O14744 637 aaPredicted RBP12.76□□□□□ -0.37
FN1-201ENST00000323926 TMCC2O75069 709 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 H2AFXP16104 143 aaPredicted RBP12.76□□□□□ -0.37
FN1-201ENST00000323926 TFE3P19532 575 aaPredicted RBP12.76□□□□□ -0.37
FN1-201ENST00000323926 ATP4AP20648 1035 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 TYW3Q6IPR3 259 aaKnown RBP12.76□□□□□ -0.37
FN1-201ENST00000323926 FAM228AQ86W67 206 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 CHST10O43529 356 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 ATP9AO75110 1047 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 ADH1AP07327 375 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 PRKCIP41743 596 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 SLC12A3P55017 1021 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 SPIRE1Q08AE8 756 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 RBFAQ8N0V3 343 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 PI4K2AQ9BTU6 479 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 ZYG11BQ9C0D3 744 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 FBXO28Q9NVF7 368 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 SNX7Q9UNH6 387 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 RIPK2O43353 540 aa12.76□□□□□ -0.37
FN1-201ENST00000323926 RAP1GAPP47736 663 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms