RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CASS4Q9NQ75 786 aa13.66□□□□□ -0.22
SKA3-202ENST00000314759 CDYLQ9Y232 598 aa13.66□□□□□ -0.22
SKA3-202ENST00000314759 GJA3Q9Y6H8 435 aa13.66□□□□□ -0.22
SKA3-202ENST00000314759 XPO1O14980 1071 aaKnown RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 PHGDHO43175 533 aaKnown RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 PTPN1P18031 435 aaKnown RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 ADSLP30566 484 aaPredicted RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 CBX3Q13185 183 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 HERC3Q15034 1050 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 PAFAH1B3Q15102 231 aaKnown RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 IL23RQ5VWK5 629 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 BORAQ6PGQ7 559 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 UNC93AQ86WB7 457 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 ZSCAN18Q8TBC5 510 aaPredicted RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 DDI1Q8WTU0 396 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 C18orf25Q96B23 403 aaPredicted RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 IL22Q9GZX6 179 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 PDGFCQ9NRA1 345 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 ERAP1Q9NZ08 941 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 COPG1Q9Y678 874 aaKnown RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 C7orf72A4D263 438 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 TTC36A6NLP5 189 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 CABYRO75952 493 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 TXNP10599 105 aaKnown RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 TPH1P17752 444 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 FUT4P22083 530 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 CSE1LP55060 971 aaKnown RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 SFSWAPQ12872 951 aaKnown RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 DPYSQ14117 519 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 RFTN1Q14699 578 aaPredicted RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 MGAT5BQ3V5L5 792 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 KCTD11Q693B1 232 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 LINC01465Q8N7H1 131 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 NLRP7Q8WX94 980 aa13.65□□□□□ -0.22
SKA3-202ENST00000314759 RSL24D1Q9UHA3 163 aaKnown RBP13.65□□□□□ -0.22
SKA3-202ENST00000314759 A0A0G2JMZ2 1700 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 LRRC37A2A6NM11 1700 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 DCLK1O15075 740 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 ZBTB24O43167 697 aaPredicted RBP13.64□□□□□ -0.23
SKA3-202ENST00000314759 VAPBO95292 243 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 APOA4P06727 396 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 HK2P52789 917 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 KIZQ2M2Z5 673 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 ALDH16A1Q8IZ83 802 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 TSPAN14Q8NG11 270 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 RDH11Q8TC12 318 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 ATP6V1E2Q96A05 226 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 VTI1BQ9UEU0 232 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 MID2Q9UJV3 735 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 TLK1Q9UKI8 766 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 TMEM233B4DJY2 109 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 FAM72CH0Y354 149 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 EEF2KO00418 725 aaKnown RBP13.64□□□□□ -0.23
SKA3-202ENST00000314759 FOXD2O60548 495 aaPredicted RBP13.64□□□□□ -0.23
SKA3-202ENST00000314759 CD68P34810 354 aaPredicted RBP13.64□□□□□ -0.23
SKA3-202ENST00000314759 GRM5P41594 1212 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 ACADSBP45954 432 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 ENTPD1P49961 510 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 ANO4Q32M45 955 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 GLRA4Q5JXX5 417 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 FAM72AQ5TYM5 149 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 FAM72DQ6L9T8 149 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 PTAR1Q7Z6K3 402 aaPredicted RBP13.64□□□□□ -0.23
SKA3-202ENST00000314759 FAM72BQ86X60 149 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 FSTL5Q8N475 847 aaPredicted RBP13.64□□□□□ -0.23
SKA3-202ENST00000314759 CNTD1Q8N815 330 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 KCTD4Q8WVF5 259 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 SCYL1Q96KG9 808 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 GPR22Q99680 433 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 CCT7Q99832 543 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 MLPHQ9BV36 600 aaPredicted RBP13.64□□□□□ -0.23
SKA3-202ENST00000314759 SETD4Q9NVD3 440 aa13.64□□□□□ -0.23
SKA3-202ENST00000314759 RUVBL2Q9Y230 463 aaKnown RBP13.64□□□□□ -0.23
SKA3-202ENST00000314759 TARM1B6A8C7 271 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 DDHD2O94830 711 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 SLC35E2BP0CK96 405 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 PSMC3P17980 439 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 CYP2B6P20813 491 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 RPL10P27635 214 aaKnown RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 NMBRP28336 390 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 AVPR1AP37288 418 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 NME3Q13232 169 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 PTK2BQ14289 1009 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 ZNF484Q5JVG2 852 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 NOL9Q5SY16 702 aaKnown RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 ZNF618Q5T7W0 954 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 ZC3HC1Q86WB0 502 aaKnown RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 ERI1Q8IV48 349 aaKnown RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 CHERPQ8IWX8 916 aaKnown RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 STYXQ8WUJ0 223 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 EME1Q96AY2 570 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 HSFY1Q96LI6 401 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 SEMA6AQ9H2E6 1030 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 SUDS3Q9H7L9 328 aaPredicted RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 SNTG2Q9NY99 539 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 GJD2Q9UKL4 321 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 CNOT11Q9UKZ1 510 aaKnown RBP13.63□□□□□ -0.23
SKA3-202ENST00000314759 PADI4Q9UM07 663 aa13.63□□□□□ -0.23
SKA3-202ENST00000314759 CCDC78A2IDD5 438 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms