RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 USP49Q70CQ1 688 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 WFIKKN2Q8TEU8 576 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ATP6V1G3Q96LB4 118 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ARHGAP28Q9P2N2 729 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 RP1P56715 2156 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 FMR1Q06787 632 aaKnown RBP eCLIP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 NDUFA5Q16718 116 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 FUT10Q6P4F1 479 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SPATA21Q7Z572 469 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SLC13A5Q86YT5 568 aaPredicted RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 CCDC103Q8IW40 242 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 C7orf61Q8IZ16 206 aa8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 SUCOQ9UBS9 1254 aaKnown RBP8.45□□□□□ -1.06
PCDHB1-201ENST00000306549 ARFGEF1Q9Y6D6 1849 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 URADA6NGE7 173 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 MEI4A8MW99 385 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 MMP13P45452 471 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 PARP15Q460N3 678 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 SERPINA13PQ6UXR4 307 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 C3orf62Q6ZUJ4 267 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 AGGF1Q8N302 714 aaeCLIP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 KIAA0895Q8NCT3 520 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 DDX47Q9H0S4 455 aaKnown RBP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 POLG2Q9UHN1 485 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ADAM21Q9UKJ8 722 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 VAV3Q9UKW4 847 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ERVW-1Q9UQF0 538 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 SNX8Q9Y5X2 465 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 RPS6KL1Q9Y6S9 549 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 H3BQF6 201 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 EML1O00423 815 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 GNSP15586 552 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ALDH9A1P49189 494 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 C21orf59P57076 290 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ITGADQ13349 1161 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 CAPSQ13938 189 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 MEA1Q16626 185 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF618Q5T7W0 954 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF670Q9BS34 389 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 PRKAG3Q9UGI9 489 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 VANGL2Q9ULK5 521 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 PIPSLA2A3N6 862 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 GRM6O15303 877 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 STAU1O95793 577 aaKnown RBP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 UMPSP11172 480 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 LRRC32Q14392 662 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ACOX1Q15067 660 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 NDUFAF6Q330K2 333 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 MCOLN2Q8IZK6 566 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 MYCBPAPQ8TBZ2 947 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 MED8Q96G25 268 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 KCTD10Q9H3F6 313 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 IL1RL2Q9HB29 575 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 RBM22Q9NW64 420 aaKnown RBP eCLIP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF232Q9UNY5 417 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 USP20Q9Y2K6 914 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 AP3M1Q9Y2T2 418 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 AP4S1Q9Y587 144 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 RARGP13631 454 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 VAV1P15498 845 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ATP4AP20648 1035 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 CYP2F1P24903 491 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 PIK3R1P27986 724 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 CRABP2P29373 138 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 MATKP42679 507 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 SERPINH1P50454 418 aaKnown RBP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ITGA1P56199 1179 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 GALNTL6Q49A17 601 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 FAM71AQ8IYT1 594 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 C7orf43Q8WVR3 580 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 SMG7Q92540 1137 aaKnown RBP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 PRRG4Q9BZD6 226 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 EFR3BQ9Y2G0 817 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 TAF4O00268 1085 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 CDH8P55286 799 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 GRSF1Q12849 480 aaKnown RBP eCLIP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 INSCQ1MX18 579 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 SMAD5Q99717 465 aaKnown RBP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ABCG4Q9H172 646 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 DEC1Q9P2X7 70 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ANKRD6Q9Y2G4 727 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 H3BM21 787 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 TRIM24O15164 1050 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 FCGR1AP12314 374 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 HPCAL1P37235 193 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 CCR4P51679 360 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ARHGDIBP52566 201 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF143P52747 638 aaPredicted RBP8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 MAPK7Q13164 816 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 HSDL1Q3SXM5 330 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 WSCD1Q658N2 575 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 SLC47A2Q86VL8 602 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ACTR8Q9H981 624 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 NPHS2Q9NP85 383 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 SLC27A6Q9Y2P4 619 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 ZNF536O15090 1300 aa8.44□□□□□ -1.06
PCDHB1-201ENST00000306549 CACNB4O00305 520 aaPredicted RBP8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 SUPT7LO94864 414 aa8.43□□□□□ -1.06
PCDHB1-201ENST00000306549 PFKLP17858 780 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms