RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 MAXP61244 160 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 POU6F1Q14863 301 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 GRTP1Q5TC63 336 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 SNX30Q5VWJ9 437 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 PKN3Q6P5Z2 889 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 CMC1Q7Z7K0 106 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 KCNMB4Q86W47 210 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 DCLK2Q8N568 766 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 ACMSDQ8TDX5 336 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 ZNF689Q96CS4 500 aaPredicted RBP6.65□□□□□ -1.34
USP47-201ENST00000305481 IMP4Q96G21 291 aaKnown RBP6.65□□□□□ -1.34
USP47-201ENST00000305481 ATXN7L3BQ96GX2 97 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 RPRD1AQ96P16 312 aaPredicted RBP6.65□□□□□ -1.34
USP47-201ENST00000305481 PLCD4Q9BRC7 762 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 C20orf96Q9NUD7 363 aaPredicted RBP6.65□□□□□ -1.34
USP47-201ENST00000305481 MTO1Q9Y2Z2 717 aaKnown RBP6.65□□□□□ -1.34
USP47-201ENST00000305481 USH1CQ9Y6N9 552 aa6.65□□□□□ -1.34
USP47-201ENST00000305481 GJB3O75712 270 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 DNAJC8O75937 253 aaPredicted RBP6.65□□□□□ -1.35
USP47-201ENST00000305481 IL1BP01584 269 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 BPGMP07738 259 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 DLDP09622 509 aaKnown RBP6.65□□□□□ -1.35
USP47-201ENST00000305481 ACVRL1P37023 503 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 ARCN1P48444 511 aaKnown RBP6.65□□□□□ -1.35
USP47-201ENST00000305481 LIMK2P53671 638 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 GEMP55040 296 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 NCALDP61601 193 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 PDE1BQ01064 536 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 CCDC15Q0P6D6 951 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 MSLNQ13421 630 aaPredicted RBP6.65□□□□□ -1.35
USP47-201ENST00000305481 PCID2Q5JVF3 399 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 STXBP5Q5T5C0 1151 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 C1orf53Q5VUE5 145 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 ESRP1Q6NXG1 681 aaKnown RBP6.65□□□□□ -1.35
USP47-201ENST00000305481 CNKSR3Q6P9H4 555 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 RFWD3Q6PCD5 774 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 CFAP52Q8N1V2 620 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 TEX26Q8N6G2 289 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 OR52K2Q8NGK3 314 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 TOP1MTQ969P6 601 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 MYLK2Q9H1R3 596 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 SLC25A51Q9H1U9 297 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 RC3H2Q9HBD1 1191 aaKnown RBP6.65□□□□□ -1.35
USP47-201ENST00000305481 SNX15Q9NRS6 342 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 IARS2Q9NSE4 1012 aaKnown RBP6.65□□□□□ -1.35
USP47-201ENST00000305481 ZNF358Q9NW07 568 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 SLC2A6Q9UGQ3 507 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 DCTN4Q9UJW0 460 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 ATP11BQ9Y2G3 1177 aa6.65□□□□□ -1.35
USP47-201ENST00000305481 E2F8A0AVK6 867 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 COCHO43405 550 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 KLKB1P03952 638 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TACR2P21452 398 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 CSRP3P50461 194 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 RENBPP51606 427 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 PGGT1BP53609 377 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 WNT3AP56704 352 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 IRX4P78413 519 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 DEFB103AP81534 67 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TNK2Q07912 1038 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 BST1Q10588 318 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 SERINC3Q13530 473 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 DLG2Q15700 870 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 C5orf22Q49AR2 442 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 HSF5Q4G112 596 aaPredicted RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 N4BP2L1Q5TBK1 243 aaPredicted RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 ATG14Q6ZNE5 492 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 PLD6Q8N2A8 252 aaKnown RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 ZNF461Q8TAF7 563 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TADA1Q96BN2 335 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 CAB39LQ9H9S4 337 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ATP13A1Q9HD20 1204 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 NT5MQ9NPB1 228 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ENTPD7Q9NQZ7 604 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TMEM216Q9P0N5 145 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 DNMT3LQ9UJW3 386 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 A0A0D9SEW6 157 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 CCDC195A0A1B0GUA6 201 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 C2orf71A6NGG8 1288 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 H3BNC9 293 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 AP3B1O00203 1094 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 BIRC5O15392 142 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 PLIN3O60664 434 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 SNNO75324 88 aaPredicted RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 RASSF9O75901 435 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 TGDSO95455 350 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 SOD2P04179 222 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 DNAJB2P25686 324 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 OR1E1P30953 314 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ATP5C1P36542 298 aaKnown RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 TUFMP49411 452 aaKnown RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 OCRLQ01968 901 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 DSC2Q02487 901 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 POLD3Q15054 466 aaPredicted RBP6.64□□□□□ -1.35
USP47-201ENST00000305481 CHI3L2Q15782 390 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 PCSK7Q16549 785 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 ANO4Q32M45 955 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 MARC1Q5VT66 337 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 FAM117BQ6P1L5 589 aa6.64□□□□□ -1.35
USP47-201ENST00000305481 KYAT3Q6YP21 454 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms