RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ITGA2P17301 1181 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 DGKAP23743 735 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 CLCN3P51790 818 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 UGT2B15P54855 530 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 DLG1Q12959 904 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 MSLNQ13421 630 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-201ENST00000302528 BROXQ5VW32 411 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 FATE1Q969F0 183 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 TMEM176AQ96HP8 235 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 PSMD13Q9UNM6 376 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 PCDHA3Q9Y5H8 950 aa10.52□□□□□ -0.73
CLIP1-201ENST00000302528 CELF2O95319 508 aaKnown RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 DBIP07108 87 aaKnown RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 AKT2P31751 481 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 PLK1P53350 603 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ARFIP1P53367 373 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ATN1P54259 1190 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 POU5F1Q01860 360 aaKnown RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 PTGES3Q15185 160 aaKnown RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ISLR2Q6UXK2 745 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 DEFB128Q7Z7B8 93 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 BHLHE22Q8NFJ8 381 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 OR5T3Q8NGG3 340 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 TAAR1Q96RJ0 339 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 FBXO44Q9H4M3 255 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 SEMA4BQ9NPR2 832 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 XPR1Q9UBH6 696 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 DCXO43602 365 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 CCNYL3P0C7X3 344 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 GIMD1P0DJR0 217 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 MGAT1P26572 445 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 TTKP33981 857 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 TUBP50607 506 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 GALNT3Q14435 633 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 CCNG2Q16589 344 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 LLGL2Q6P1M3 1020 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 B3GNT6Q6ZMB0 384 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 FAM98AQ8NCA5 519 aaKnown RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 PHF10Q8WUB8 498 aaKnown RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 SUSD6Q92537 303 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ZHX1-C8orf76Q96EF9 292 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 TBL1YQ9BQ87 522 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 C8orf4Q9NR00 106 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 A0A0A6YYK5 440 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ARHGEF33A8MVX0 844 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 VTNP04004 478 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 MYBL2P10244 700 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 CAPGP40121 348 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ARMC12Q5T9G4 340 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 PRAMEF18Q5VWM3 479 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 RNF19BQ6ZMZ0 732 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 OAFQ86UD1 273 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ARRDC4Q8NCT1 418 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 KAT5Q92993 513 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 KLHL32Q96NJ5 620 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 PLEKHG4BQ96PX9 1271 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 APBA2Q99767 749 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 DDX43Q9NXZ2 648 aaKnown RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 MORF4L1Q9UBU8 362 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 OGDHLQ9ULD0 1010 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 SSR3Q9UNL2 185 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 MAPRE3Q9UPY8 281 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 GRIP1Q9Y3R0 1128 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 TNPO3Q9Y5L0 923 aaKnown RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 PROSCO94903 275 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ADSSP30520 456 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 NAMPTP43490 491 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ACTR3P61158 418 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 FOXR1Q6PIV2 292 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 TEX47Q8TBZ9 253 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 CXorf40BQ96DE9 158 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ATG4CQ96DT6 458 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 PPP1R16AQ96I34 528 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 OMDQ99983 421 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 GPN1Q9HCN4 374 aaPredicted RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 CCDC59Q9P031 241 aaKnown RBP10.51□□□□□ -0.73
CLIP1-201ENST00000302528 ARMCX1Q9P291 453 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 NAALADL1Q9UQQ1 740 aa10.51□□□□□ -0.73
CLIP1-201ENST00000302528 A0A0B4J269 797 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 FARP2O94887 1054 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-201ENST00000302528 SUPT20HL2P0C7V6 817 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 POLR2EP19388 210 aaKnown RBP10.5□□□□□ -0.73
CLIP1-201ENST00000302528 PON1P27169 355 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 PKNOX1P55347 436 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 IL18R1Q13478 541 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 HKDC1Q2TB90 917 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 USP45Q70EL2 814 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 HNRNPLLQ8WVV9 542 aaKnown RBP10.5□□□□□ -0.73
CLIP1-201ENST00000302528 RAD51AP1Q96B01 352 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 APOPT1Q96IL0 206 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 KCNF1Q9H3M0 494 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 CDHR5Q9HBB8 845 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 SHOC2Q9UQ13 582 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 A0A087X1B8 175 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 ABHD14A-ACY1A0A1B0GW23 586 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 OR7A10O76100 309 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 LSM8O95777 96 aaKnown RBP10.5□□□□□ -0.73
CLIP1-201ENST00000302528 RRM1P23921 792 aa10.5□□□□□ -0.73
CLIP1-201ENST00000302528 CHRNA5P30532 468 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms