RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 PGBD5Q8N414 524 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 SP7Q8TDD2 431 aaPredicted RBP22.66■■□□□ 1.22
SMAD1-201ENST00000302085 CERS2Q96G23 380 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 MAGEB18Q96M61 343 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 RAD9AQ99638 391 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 PAIP2Q9BPZ3 127 aaKnown RBP22.66■■□□□ 1.22
SMAD1-201ENST00000302085 TRPC7Q9HCX4 862 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 GRID1Q9ULK0 1009 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 SOX13Q9UN79 622 aa22.66■■□□□ 1.22
SMAD1-201ENST00000302085 ALPK3Q96L96 1907 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 A0A0D9SEW6 157 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.65■■□□□ 1.22
SMAD1-201ENST00000302085 LCHNA4D1U4 455 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 KRT38O76015 456 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 SERPINB9P50453 376 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 ERVFC1P60507 584 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 MAXP61244 160 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 IHHQ14623 411 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 SMAD1Q15797 465 aaKnown RBP22.65■■□□□ 1.22
SMAD1-201ENST00000302085 PABPC1LQ4VXU2 614 aaKnown RBP22.65■■□□□ 1.22
SMAD1-201ENST00000302085 RANBP10Q6VN20 620 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.65■■□□□ 1.22
SMAD1-201ENST00000302085 TCP10LQ8TDR4 215 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 CDKL2Q92772 493 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 MFSD3Q96ES6 412 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 C12orf65Q9H3J6 166 aaKnown RBP22.65■■□□□ 1.22
SMAD1-201ENST00000302085 ASB3Q9Y575 518 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 PSAT1Q9Y617 370 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 RFPL1O75677 317 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 ZWINTO95229 277 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 NUMBP49757 651 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 WNT3AP56704 352 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 GNA12Q03113 381 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 MPP3Q13368 585 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 ZNF449Q6P9G9 518 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 HS6ST3Q8IZP7 471 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 ARL14EPQ8N8R7 260 aaPredicted RBP22.65■■□□□ 1.22
SMAD1-201ENST00000302085 ADAMTS19Q8TE59 1207 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 NSMCE1Q8WV22 266 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 MTBPQ96DY7 904 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 KIFC1Q9BW19 673 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 LRRC3Q9BY71 257 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 MAGEH1Q9H213 219 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 ALG13Q9NP73 1137 aaKnown RBP22.65■■□□□ 1.22
SMAD1-201ENST00000302085 ENTPD7Q9NQZ7 604 aa22.65■■□□□ 1.22
SMAD1-201ENST00000302085 EBAG9O00559 213 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 TSPAN3O60637 253 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 MMP2P08253 660 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 NMBRP28336 390 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 ETFBP38117 255 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 NEK3P51956 506 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 SMAD3P84022 425 aaKnown RBP22.64■■□□□ 1.21
SMAD1-201ENST00000302085 DSC2Q02487 901 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 ITKQ08881 620 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 NAB1Q13506 487 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 LBRQ14739 615 aaKnown RBP22.64■■□□□ 1.21
SMAD1-201ENST00000302085 MROH9Q5TGP6 573 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 PACS1Q6VY07 963 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 GAREM2Q75VX8 874 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 KDELC2Q7Z4H8 507 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 RASSF3Q86WH2 238 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 OR7D4Q8NG98 312 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 PDFQ9HBH1 243 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 SLC17A7Q9P2U7 560 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 STOML2Q9UJZ1 356 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 PLXNA4Q9HCM2 1894 aa22.64■■□□□ 1.21
SMAD1-201ENST00000302085 TTC24A2A3L6 582 aaPredicted RBP22.63■■□□□ 1.21
SMAD1-201ENST00000302085 CLDN11O75508 207 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 OLFM2O95897 454 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 TAC1P20366 129 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 BMPR1AP36894 532 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 ZXDBP98169 803 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 PSRC1Q6PGN9 363 aaPredicted RBP22.63■■□□□ 1.21
SMAD1-201ENST00000302085 LVRNQ6Q4G3 990 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 ARRDC2Q8TBH0 407 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 HERVK_113Q902F9 699 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 SLC4A7Q9Y6M7 1214 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 GREM1O60565 184 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 HDCP19113 662 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 HOXD9P28356 352 aaPredicted RBP22.63■■□□□ 1.21
SMAD1-201ENST00000302085 CD86P42081 329 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 PCID2Q5JVF3 399 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 HHATQ5VTY9 493 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 TIFABQ6ZNK6 161 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 APOPT1Q96IL0 206 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 SEC16BQ96JE7 1060 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 ZNF778Q96MU6 729 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 TGS1Q96RS0 853 aaKnown RBP22.63■■□□□ 1.21
SMAD1-201ENST00000302085 TCF25Q9BQ70 676 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 FSD1LQ9BXM9 530 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 ATXN3LQ9H3M9 355 aa22.63■■□□□ 1.21
SMAD1-201ENST00000302085 TM9SF1O15321 606 aa22.62■■□□□ 1.21
SMAD1-201ENST00000302085 LPXNO60711 386 aa22.62■■□□□ 1.21
SMAD1-201ENST00000302085 ADH1AP07327 375 aa22.62■■□□□ 1.21
SMAD1-201ENST00000302085 GABRR2P28476 465 aa22.62■■□□□ 1.21
SMAD1-201ENST00000302085 PCSK7Q16549 785 aa22.62■■□□□ 1.21
SMAD1-201ENST00000302085 TMCO4Q5TGY1 634 aa22.62■■□□□ 1.21
SMAD1-201ENST00000302085 PKN3Q6P5Z2 889 aa22.62■■□□□ 1.21
SMAD1-201ENST00000302085 PIGWQ7Z7B1 504 aa22.62■■□□□ 1.21
SMAD1-201ENST00000302085 TMC8Q8IU68 726 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms