RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 HNRNPDQ14103 355 aaKnown RBP24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 ADGRG6Q86SQ4 1221 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 NXNL1Q96CM4 212 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 ADAM28Q9UKQ2 775 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 ZSWIM8A7E2V4 1837 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 ZC3HC1Q86WB0 502 aaKnown RBP24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 RNF135Q8IUD6 432 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 LPPQ93052 612 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 EMID1Q96A84 441 aaPredicted RBP24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 PAAF1Q9BRP4 392 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 COLEC11Q9BWP8 271 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 WDCPQ9H6R7 721 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 FBXW11Q9UKB1 542 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 DTNAQ9Y4J8 743 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 SLC35E2BP0CK96 405 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 HNRNPLP14866 589 aaKnown RBP eCLIP24.78■■□□□ 1.562e-12■■■■□ 24.2
SPTSSA-201ENST00000298130 TLR1Q15399 786 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 ESRP1Q6NXG1 681 aaKnown RBP24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 ISL2Q96A47 359 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 SPATA16Q9BXB7 569 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 C1QTNF1Q9BXJ1 281 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 FAM96AQ9H5X1 160 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 RNF181Q9P0P0 153 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 NUDT5Q9UKK9 219 aa24.78■■□□□ 1.56
SPTSSA-201ENST00000298130 AURKAO14965 403 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 HDAC3O15379 428 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 BEX3Q00994 111 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 SEMA3BQ13214 749 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 NOMO2Q5JPE7 1267 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 ST13P4Q8IZP2 240 aaPredicted RBP24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 CENPLQ8N0S6 344 aaPredicted RBP24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 GALNT4Q8N4A0 578 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 ICA1LQ8NDH6 482 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 JADE3Q92613 823 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 TIMM44O43615 452 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 CEACAM7Q14002 265 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 FLOT2Q14254 428 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 PAOXQ6QHF9 649 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 LSMEM2Q8N112 164 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 KYQ8NBH2 561 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 NPLOC4Q8TAT6 608 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 ZSCAN18Q8TBC5 510 aaPredicted RBP24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 MAML3Q96JK9 1138 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 CYP4F12Q9HCS2 524 aa24.77■■□□□ 1.56
SPTSSA-201ENST00000298130 RBM47A0AV96 593 aaKnown RBP24.76■■□□□ 1.56
SPTSSA-201ENST00000298130 DLX3O60479 287 aa24.76■■□□□ 1.56
SPTSSA-201ENST00000298130 HDCP19113 662 aa24.76■■□□□ 1.56
SPTSSA-201ENST00000298130 ANO4Q32M45 955 aa24.76■■□□□ 1.56
SPTSSA-201ENST00000298130 APLFQ8IW19 511 aaPredicted RBP24.76■■□□□ 1.56
SPTSSA-201ENST00000298130 SENP8Q96LD8 212 aa24.76■■□□□ 1.56
SPTSSA-201ENST00000298130 RAP2CQ9Y3L5 183 aa24.76■■□□□ 1.56
SPTSSA-201ENST00000298130 TLL2Q9Y6L7 1015 aa24.76■■□□□ 1.56
SPTSSA-201ENST00000298130 FBXO21O94952 628 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 SNUPNO95149 360 aaKnown RBP24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 MT-CO1P00395 513 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 SPATA31D3P0C874 917 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 WARSP23381 471 aaKnown RBP24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 PNPLA4P41247 253 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 RAB27AP51159 221 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 SNAPC2Q13487 334 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 CYLC2Q14093 348 aaPredicted RBP24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 LIPMQ5VYY2 423 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 AP1ARQ63HQ0 302 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 SPATA31D4Q6ZUB0 917 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 PDZD4Q76G19 769 aaPredicted RBP24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 FAM35AQ86V20 835 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 PQLC1Q8N2U9 271 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 SHCBP1Q8NEM2 672 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 BHLHE22Q8NFJ8 381 aaPredicted RBP24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 DCUN1D1Q96GG9 259 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 CLIC5Q9NZA1 410 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 TRIP12Q14669 1992 aaPredicted RBP24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 C9IYK1 514 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 PGK1P00558 417 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 PLK1P53350 603 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 GJA9P57773 515 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 C3orf58Q8NDZ4 430 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 TEKT5Q96M29 485 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 DRC3Q9H069 523 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 ZDHHC7Q9NXF8 308 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 UBAP1Q9NZ09 502 aa24.76■■□□□ 1.55
SPTSSA-201ENST00000298130 RGSL1A5PLK6 1076 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 TMEM114B3SHH9 223 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 THRAP10827 490 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 CHRNA4P43681 627 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 ZYG11AQ6WRX3 759 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 GPR142Q7Z601 462 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 MFN1Q8IWA4 741 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 SREK1Q8WXA9 508 aaKnown RBP24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 NMD3Q96D46 503 aaKnown RBP24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 APPL1Q9UKG1 709 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 PMPCBO75439 489 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 CLCNKBP51801 687 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 LILRA2Q8N149 483 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 PCDH20Q8N6Y1 951 aaKnown RBP24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 SLC10A4Q96EP9 437 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 CNBD2Q96M20 576 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 TSNARE1Q96NA8 513 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 NDNQ99608 321 aa24.75■■□□□ 1.55
SPTSSA-201ENST00000298130 GPR22Q99680 433 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms