RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 SIGLEC16A6NMB1 481 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 RHPN2P1A8MT19 583 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 DAB1O75553 588 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 SLC25A12O75746 678 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 GJB6O95452 261 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 PCCBP05166 539 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 RXRGP48443 463 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 RTP1P59025 263 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 SP2Q02086 613 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 NCF4Q15080 339 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 TRIP10Q15642 601 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 FUT10Q6P4F1 479 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 IL27RAQ6UWB1 636 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 MACC1Q6ZN28 852 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 PAGE2Q7Z2X7 111 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 FAM20CQ8IXL6 584 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 VGLL2Q8N8G2 317 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 ACTRT1Q8TDG2 376 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 TSC22D3Q99576 134 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 SEMA3CQ99985 751 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 VTI1BQ9UEU0 232 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 KLHL3Q9UH77 587 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 VIPP01282 170 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 VAV1P15498 845 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 HSD17B3P37058 310 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 ELK3P41970 407 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 TAF10Q12962 218 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 USP4Q13107 963 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 NAB1Q13506 487 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 TATDN1Q6P1N9 297 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 RNF44Q7L0R7 432 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 NKAPQ8N5F7 415 aaKnown RBP7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 TMEM161BQ8NDZ6 487 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 BTBD9Q96Q07 612 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 ZDHHC4Q9NPG8 344 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 AVENQ9NQS1 362 aaPredicted RBP7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 IMP3Q9NV31 184 aaKnown RBP7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 ADPRHL2Q9NX46 363 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 SUCOQ9UBS9 1254 aaKnown RBP7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 SLC24A2Q9UI40 661 aa7.01□□□□□ -1.29
GAPVD1-202ENST00000297933 CLUHO75153 1309 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 GTPBP1O00178 669 aaKnown RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 ATP9AO75110 1047 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 FSBPO95073 299 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ITGAXP20702 1163 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 KDELR1P24390 212 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 RBL1P28749 1068 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 CORO1AP31146 461 aaKnown RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 NUP107P57740 925 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 DLG4P78352 724 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 MRPS5P82675 430 aaKnown RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 ELP6Q0PNE2 266 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 AGKQ53H12 422 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 PPP1R15BQ5SWA1 713 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 N4BP2L1Q5TBK1 243 aaPredicted RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 FAM45BPQ6NSW5 357 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 PACS1Q6VY07 963 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 TAF8Q7Z7C8 310 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ATG16L2Q8NAA4 619 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 FAM45AQ8TCE6 357 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 HERVK_113Q902F9 699 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 FIG4Q92562 907 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 PROX1Q92786 737 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 SHDQ96IW2 340 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 S100A13Q99584 98 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 MRPL45Q9BRJ2 306 aaKnown RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 PABPC3Q9H361 631 aaKnown RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 HPSEQ9Y251 543 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ASF1AQ9Y294 204 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 PCDHA2Q9Y5H9 948 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 COPG1Q9Y678 874 aaKnown RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 A0A0G2JLL6 359 aaPredicted RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 KLHL41O60662 606 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 MT-CO1P00395 513 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 SMPD1P17405 629 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ARF4P18085 180 aaPredicted RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 PSMB4P28070 264 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 LSP1P33241 339 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ZNF143P52747 638 aaPredicted RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 TRAF2Q12933 501 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 CRY2Q49AN0 593 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 EARS2Q5JPH6 523 aaKnown RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 VSTM1Q6UX27 236 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 CLEC17AQ6ZS10 378 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ZNF621Q6ZSS3 439 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 PRRT2Q7Z6L0 340 aaPredicted RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 CTU1Q7Z7A3 348 aaKnown RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 FAM228AQ86W67 206 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 HEXDCQ8WVB3 486 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 LENG1Q96BZ8 264 aaPredicted RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 MYO19Q96H55 970 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ASB2Q96Q27 587 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 IL22Q9GZX6 179 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ATAD3AQ9NVI7 634 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ERVW-1Q9UQF0 538 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 LZTS1Q9Y250 596 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 LOC102724159A0A0B4J2E5 919 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 ANKRD65E5RJM6 399 aa7□□□□□ -1.29
GAPVD1-202ENST00000297933 BUD23O43709 281 aaKnown RBP7□□□□□ -1.29
GAPVD1-202ENST00000297933 USP12O75317 370 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms