RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CDRT15Q96T59 188 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 POLE3Q9NRF9 147 aa12.02□□□□□ -0.49
SYNGAP1-201ENST00000293748 TMEM265A0A087WTH1 108 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 C2orf81A6NN90 581 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 LIN7AO14910 233 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 INPP4BO15327 924 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 AP1G2O75843 785 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 PROCP04070 461 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 PIK3R1P27986 724 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 PRKCIP41743 596 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 IL12RB1P42701 662 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 VAC14Q08AM6 782 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 FAM187BQ17R55 369 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 RINLQ6ZS11 566 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 SNX32Q86XE0 403 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 DCP1BQ8IZD4 617 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 SLC35C1Q96A29 364 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 TSPAN18Q96SJ8 248 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 APOL4Q9BPW4 351 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 FANCEQ9HB96 536 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 AP4E1Q9UPM8 1137 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 TSPAN1O60635 241 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 TADA2AO75478 443 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 THP07101 528 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 OR1G1P47890 313 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 NCKAP1LP55160 1127 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 MBTD1Q05BQ5 628 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 CYP24A1Q07973 514 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 AUHQ13825 339 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 ARHGEF7Q14155 803 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 GALNTL6Q49A17 601 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 CCDC149Q6ZUS6 474 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 SLFN11Q7Z7L1 901 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 CHSY1Q86X52 802 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 EID3Q8N140 333 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 GRIP2Q9C0E4 1043 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 WDCPQ9H6R7 721 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 CYP3A43Q9HB55 503 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 ENOPH1Q9UHY7 261 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 CRLS1Q9UJA2 301 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 UBQLN1Q9UMX0 589 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 DCXO43602 365 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 RIPOR1Q6ZS17 1223 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 CAMK1DQ8IU85 385 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 GINS4Q9BRT9 223 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 AGO3Q9H9G7 860 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 DPP7Q9UHL4 492 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 NDUFAF1Q9Y375 327 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 LRRC37A2A6NM11 1700 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 DPYSL4O14531 572 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 GJB5O95377 273 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 MAP3K6O95382 1288 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 MLNP12872 115 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 TKTP29401 623 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 KCNJ2P63252 427 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 GCNT1Q02742 428 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 CNTN1Q12860 1018 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 FASTKQ14296 549 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 ECM1Q16610 540 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 OTUD3Q5T2D3 398 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 BNIPLQ7Z465 357 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 NKX2-4Q9H2Z4 354 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 NOL6Q9H6R4 1146 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 CACNA2D2Q9NY47 1150 aa12.01□□□□□ -0.49
SYNGAP1-201ENST00000293748 DYTNA2CJ06 578 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 ZBTB42B2RXF5 422 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 ZNF682O95780 498 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 RB1P06400 928 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 ARF4P18085 180 aaPredicted RBP12□□□□□ -0.49
SYNGAP1-201ENST00000293748 ANGPT1Q15389 498 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 DDR2Q16832 855 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 ADCK2Q7Z695 626 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 STKLD1Q8NE28 680 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 HELQQ8TDG4 1101 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 UGT2B28Q9BY64 529 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 ROGDIQ9GZN7 287 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 PLGRKTQ9HBL7 147 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 CENPXA8MT69 81 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 MEI4A8MW99 385 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 STBD1O95210 358 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 CD151P48509 253 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 NME5P56597 212 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 PLIN5Q00G26 463 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 GRIK3Q13003 919 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 CSHL1Q14406 222 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 RGS21Q2M5E4 152 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 STK32CQ86UX6 486 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 RXFP2Q8WXD0 754 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 UROC1Q96N76 676 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 SPATA16Q9BXB7 569 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 FZD8Q9H461 694 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 ENTPD7Q9NQZ7 604 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 SPG21Q9NZD8 308 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 VANGL2Q9ULK5 521 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 TMEM191CA6NGB0 347 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 FAM20BO75063 409 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 WFS1O76024 890 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 SERPIND1P05546 499 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 ABHD2P08910 425 aa12□□□□□ -0.49
SYNGAP1-201ENST00000293748 PAX3P23760 479 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms