RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 AGR3Q8TD06 166 aa15.32■□□□□ 0.04
CCDC116-201ENST00000292779 MOCOSQ96EN8 888 aa15.32■□□□□ 0.04
CCDC116-201ENST00000292779 TMEM209Q96SK2 561 aa15.32■□□□□ 0.04
CCDC116-201ENST00000292779 GPR22Q99680 433 aa15.32■□□□□ 0.04
CCDC116-201ENST00000292779 ACBD6Q9BR61 282 aa15.32■□□□□ 0.04
CCDC116-201ENST00000292779 KIFC1Q9BW19 673 aa15.32■□□□□ 0.04
CCDC116-201ENST00000292779 OSBPL2Q9H1P3 480 aa15.32■□□□□ 0.04
CCDC116-201ENST00000292779 DMAP1Q9NPF5 467 aaPredicted RBP15.32■□□□□ 0.04
CCDC116-201ENST00000292779 TRIM17Q9Y577 477 aa15.32■□□□□ 0.04
CCDC116-201ENST00000292779 BPTFQ12830 3046 aa15.32■□□□□ 0.04
CCDC116-201ENST00000292779 MAP3K7O43318 606 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 DCXO43602 365 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 MT-CYBP00156 380 aaPredicted RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 ITGA7Q13683 1181 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 ANO4Q32M45 955 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 SLC9B1Q4ZJI4 515 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 CAPRIN2Q6IMN6 1127 aaKnown RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 LINC00523Q86TU6 105 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 LRRTM3Q86VH5 581 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 ZC3HC1Q86WB0 502 aaKnown RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 METTL23Q86XA0 190 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 KBTBD2Q8IY47 623 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 KLHDC9Q8NEP7 349 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 MAPK15Q8TD08 544 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 ZNF419Q96HQ0 510 aaPredicted RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 TSGA13Q96PP4 275 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 TASP1Q9H6P5 420 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 ACSS2Q9NR19 701 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 LRCH1Q9Y2L9 728 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 TTC3P53804 2025 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 LOC100653049A0A140TA62 436 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 E9PBE3 544 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 TK2O00142 265 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 CACNG3O60359 315 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 KLHL41O60662 606 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 KRT34O76011 436 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 IGLV3-25P01717 112 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 ASGR1P07306 291 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 SKIP12755 728 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 HOXD10P28358 340 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 THPOP40225 353 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 CSRP3P50461 194 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 AP2B1P63010 937 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 KLC1Q07866 573 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 PEX6Q13608 980 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 ZRSR2Q15696 482 aaKnown RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 LHX8Q68G74 356 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 ARHGAP12Q8IWW6 846 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 TDRD5Q8NAT2 981 aaKnown RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 OR10T2Q8NGX3 314 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 SREK1Q8WXA9 508 aaKnown RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 CMTM5Q96DZ9 223 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 SPDL1Q96EA4 605 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 TTC1Q99614 292 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 GATA5Q9BWX5 397 aaPredicted RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 OXSMQ9NWU1 459 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 DONSONQ9NYP3 566 aa15.31■□□□□ 0.04
CCDC116-201ENST00000292779 AAR2Q9Y312 384 aaKnown RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 MRPL42Q9Y6G3 142 aaKnown RBP15.31■□□□□ 0.04
CCDC116-201ENST00000292779 NLRC5Q86WI3 1866 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 NYNRINQ9P2P1 1898 aaKnown RBP15.3■□□□□ 0.04
CCDC116-201ENST00000292779 AP3B1O00203 1094 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 PHGDHO43175 533 aaKnown RBP15.3■□□□□ 0.04
CCDC116-201ENST00000292779 PSMD3O43242 534 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 ZBTB14O43829 449 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 CCNCP24863 283 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 GABRB3P28472 473 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 MRPS35P82673 323 aaKnown RBP15.3■□□□□ 0.04
CCDC116-201ENST00000292779 ZNF33AQ06730 810 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 POU6F1Q14863 301 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 CD300LGQ6UXG3 332 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 KLHDC8BQ8IXV7 354 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 ATPAF2Q8N5M1 289 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 IPMKQ8NFU5 416 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 UCMAQ8WVF2 138 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 PKMYT1Q99640 499 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 TBL1YQ9BQ87 522 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 C1QTNF1Q9BXJ1 281 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 ACE2Q9BYF1 805 aaPredicted RBP15.3■□□□□ 0.04
CCDC116-201ENST00000292779 RHOJQ9H4E5 214 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 GPAMQ9HCL2 828 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 ARHGEF38Q9NXL2 777 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 SAGE1Q9NXZ1 904 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 TLK1Q9UKI8 766 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 PPM1HQ9ULR3 514 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 INPP5FQ9Y2H2 1132 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 PATJQ8NI35 1801 aa15.3■□□□□ 0.04
CCDC116-201ENST00000292779 H2AFYO75367 372 aaKnown RBP15.29■□□□□ 0.04
CCDC116-201ENST00000292779 SORBS2O94875 1100 aaKnown RBP15.29■□□□□ 0.04
CCDC116-201ENST00000292779 BAG2O95816 211 aa15.29■□□□□ 0.04
CCDC116-201ENST00000292779 AHSGP02765 367 aa15.29■□□□□ 0.04
CCDC116-201ENST00000292779 ITGB1P05556 798 aa15.29■□□□□ 0.04
CCDC116-201ENST00000292779 CHRNGP07510 517 aa15.29■□□□□ 0.04
CCDC116-201ENST00000292779 SBK3P0C264 359 aa15.29■□□□□ 0.04
CCDC116-201ENST00000292779 AVPR1AP37288 418 aa15.29■□□□□ 0.04
CCDC116-201ENST00000292779 HADHAP40939 763 aa15.29■□□□□ 0.04
CCDC116-201ENST00000292779 EPHB1P54762 984 aa15.29■□□□□ 0.04
CCDC116-201ENST00000292779 EIF4EBP2Q13542 120 aaPredicted RBP15.29■□□□□ 0.04
CCDC116-201ENST00000292779 USP10Q14694 798 aaKnown RBP15.29■□□□□ 0.04
CCDC116-201ENST00000292779 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms