RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MAGEB5Q9BZ81 275 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 KIAA1522Q9P206 1035 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 G3BP2Q9UN86 482 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 ITM2BQ9Y287 266 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 TRANK1O15050 2925 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 CCDC78A2IDD5 438 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 GRXCR2A6NFK2 248 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 KDELR3O43731 214 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 RAMP2O60895 175 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 TBL1XO60907 577 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 GEMIN4P57678 1058 aaKnown RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 SERINC3Q13530 473 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 ALFQ53S48 1182 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 ARMC3Q5W041 872 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 VITQ6UXI7 678 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 KLHDC8BQ8IXV7 354 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 DEFB123Q8N688 67 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 MAGEB10Q96LZ2 347 aaPredicted RBP8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 DNPEPQ9ULA0 475 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 RP1P56715 2156 aa8.6□□□□□ -1.03
PTPDC1-201ENST00000288976 HEPACAM2A8MVW5 462 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 SCAMP3O14828 347 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 CACNG3O60359 315 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 HSPA9P38646 679 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 RALGPS1Q5JS13 557 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 LGSNQ5TDP6 509 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 HHATQ5VTY9 493 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 CXorf57Q6NSI4 855 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 ANGPTL8Q6UXH0 198 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 NPNTQ6UXI9 565 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 ADCK2Q7Z695 626 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 TMCO5AQ8N6Q1 288 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 RIN3Q8TB24 985 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 C1orf54Q8WWF1 131 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM83CQ9BQN1 747 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 PHF7Q9BWX1 381 aaPredicted RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 NOL6Q9H6R4 1146 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 PDFQ9HBH1 243 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 GDF3Q9NR23 364 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 DNAJC17Q9NVM6 304 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 MATN3O15232 486 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 SERPIND1P05546 499 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 RHOCP08134 193 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 OR1E1P30953 314 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 GNA12Q03113 381 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 CAV1Q03135 178 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 GBE1Q04446 702 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 PRPSAP1Q14558 356 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 TRIP13Q15645 432 aaPredicted RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 HEATR6Q6AI08 1181 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 ALG1LQ6GMV1 187 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 SDE2Q6IQ49 451 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 RFWD3Q6PCD5 774 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 DARS2Q6PI48 645 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 PCGF5Q86SE9 256 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 JAMLQ86YT9 394 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 TEX26Q8N6G2 289 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 HTR3CQ8WXA8 447 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 DNASE1L2Q92874 299 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 RMDN1Q96DB5 314 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 RSPRY1Q96DX4 576 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 CIPCQ9C0C6 399 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 SMG9Q9H0W8 520 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 IGSF9Q9P2J2 1179 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 SLC27A6Q9Y2P4 619 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 CACNA1BQ00975 2339 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 RASA4BC9J798 803 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 RASA4O43374 803 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 MAFKO60675 156 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 PRAMEF11O60813 436 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 OPHN1O60890 802 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 CNTN5O94779 1100 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 CYP17A1P05093 508 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 RBP3P10745 1247 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 ADH5P11766 374 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 PSMC3P17980 439 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 SGSHP51688 502 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 IRX4P78413 519 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 SULT2A1Q06520 285 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 NR1H3Q13133 447 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 CUL1Q13616 776 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 POLD3Q15054 466 aaPredicted RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 ADGRG2Q8IZP9 1017 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 DCAF4L2Q8NA75 395 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 MYEOVQ96EZ4 313 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 XPO6Q96QU8 1125 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 SLC39A8Q9C0K1 460 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 DDX47Q9H0S4 455 aaKnown RBP8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 USP29Q9HBJ7 922 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 FAM114A2Q9NRY5 505 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 MPP6Q9NZW5 540 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 WHRNQ9P202 907 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 PAK5Q9P286 719 aa8.59□□□□□ -1.03
PTPDC1-201ENST00000288976 POC1B-GALNT4F8VUJ3 575 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 CES1P23141 567 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 NFKBIAP25963 317 aa8.59□□□□□ -1.04
PTPDC1-201ENST00000288976 MAGEA6P43360 314 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms