RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 PDFQ9HBH1 243 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 IL1RAPL1Q9NZN1 696 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PLLPQ9Y342 182 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 INSL5Q9Y5Q6 135 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 H3BNC9 293 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PRAMEF11O60813 436 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 NEBLO76041 1014 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 STC2O76061 302 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 ALDOAP04075 364 aaKnown RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 MMP2P08253 660 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 ITGA2BP08514 1039 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 LINC00271P0C7V0 271 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 ACRP10323 421 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 HSPA8P11142 646 aaKnown RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 TPH1P17752 444 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 NMBRP28336 390 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 OR1E1P30953 314 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 CRHR1P34998 444 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 MAGEA12P43365 314 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 SERPINB4P48594 390 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 CREMQ03060 361 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 TWF1Q12792 350 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PCID2Q5JVF3 399 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 TEDDM1Q5T9Z0 273 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 GRTP1Q5TC63 336 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 MARC1Q5VT66 337 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PKN3Q6P5Z2 889 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 FAM47EQ6ZV65 393 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 AUTS2Q8WXX7 1259 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 CCT6BQ92526 530 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 KLHL5Q96PQ7 755 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 YME1L1Q96TA2 773 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 RBBP8Q99708 897 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 KLF16Q9BXK1 252 aaPredicted RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PITPNM3Q9BZ71 974 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 NACA2Q9H009 215 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 ZBP1Q9H171 429 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 RXFP1Q9HBX9 757 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 ARNT2Q9HBZ2 717 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 NT5MQ9NPB1 228 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 IL23AQ9NPF7 189 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 CHRAC1Q9NRG0 131 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 VPS45Q9NRW7 570 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 MRPL17Q9NRX2 175 aaKnown RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PCMTD2Q9NV79 361 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 UXTQ9UBK9 157 aaPredicted RBP10.34□□□□□ -0.75
C9orf43-201ENST00000288462 STK39Q9UEW8 545 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PHTF1Q9UMS5 762 aa10.34□□□□□ -0.75
C9orf43-201ENST00000288462 PRRG1O14668 218 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 PMPCBO75439 489 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 IL1BP01584 269 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 KLKB1P03952 638 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 HOXD9P28356 352 aaPredicted RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 CORO1AP31146 461 aaKnown RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ACVRL1P37023 503 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 LIMK2P53671 638 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 CSE1LP55060 971 aaKnown RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 CDH4P55283 916 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 WNT3AP56704 352 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 HTRA4P83105 476 aaPredicted RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 RABGAP1LQ5R372 815 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 STXBP5Q5T5C0 1151 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 TMCO4Q5TGY1 634 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 PDPK2PQ6A1A2 396 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 RFWD3Q6PCD5 774 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 POTEHQ6S545 545 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 CHST9Q7L1S5 443 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 TMEM150AQ86TG1 271 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 KCNMB4Q86W47 210 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 PGBD5Q8N414 524 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 OTUD6BQ8N6M0 293 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 PPHLN1Q8NEY8 458 aaKnown RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 NSMCE1Q8WV22 266 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 PABPC5Q96DU9 382 aaKnown RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ZNF599Q96NL3 588 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 PLCD4Q9BRC7 762 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 FSD1LQ9BXM9 530 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 IQCGQ9H095 443 aaKnown RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 SLCO1B3Q9NPD5 702 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ARL2BPQ9Y2Y0 163 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 TCAF1Q9Y4C2 921 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 C2orf78A6NCI8 922 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 CCT8L1PA6NM43 557 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ANKRD65E5RJM6 399 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 TPP1O14773 563 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 TEX28O15482 410 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 OLFM2O95897 454 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 EPHB3P54753 998 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 IHHQ14623 411 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 LBRQ14739 615 aaKnown RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 LACTB2Q53H82 288 aaPredicted RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 ALG1LQ6GMV1 187 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 CCDC121Q6ZUS5 278 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 DNAJB7Q7Z6W7 309 aaPredicted RBP10.33□□□□□ -0.76
C9orf43-201ENST00000288462 DENND1CQ8IV53 801 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 CNTN4Q8IWV2 1026 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 NDUFAF2Q8N183 169 aa10.33□□□□□ -0.76
C9orf43-201ENST00000288462 CFAP52Q8N1V2 620 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms