RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ASCL5Q7RTU5 278 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 NKD2Q969F2 451 aaPredicted RBP20.24■□□□□ 0.83
TIMP4-201ENST00000287814 VOPP1Q96AW1 172 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 TM6SF2Q9BZW4 377 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 SEMA4AQ9H3S1 761 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 DDX56Q9NY93 547 aaKnown RBP20.24■□□□□ 0.83
TIMP4-201ENST00000287814 SERGEFQ9UGK8 458 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 IPO11Q9UI26 975 aaKnown RBP20.24■□□□□ 0.83
TIMP4-201ENST00000287814 PPM1HQ9ULR3 514 aa20.24■□□□□ 0.83
TIMP4-201ENST00000287814 SMG5Q9UPR3 1016 aaKnown RBP20.24■□□□□ 0.83
TIMP4-201ENST00000287814 NYNRINQ9P2P1 1898 aaKnown RBP20.23■□□□□ 0.83
TIMP4-201ENST00000287814 MID1O15344 667 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 PALMO75781 387 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 MAP3K6O95382 1288 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 ACADMP11310 421 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 SLC8A1P32418 973 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 DNA2P51530 1060 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 GEMIN4P57678 1058 aaKnown RBP20.23■□□□□ 0.83
TIMP4-201ENST00000287814 INO80DQ53TQ3 878 aaPredicted RBP20.23■□□□□ 0.83
TIMP4-201ENST00000287814 ABCA7Q8IZY2 2146 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 TXLNBQ8N3L3 684 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 PCDH20Q8N6Y1 951 aaKnown RBP20.23■□□□□ 0.83
TIMP4-201ENST00000287814 OR8D1Q8WZ84 308 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 ISG20Q96AZ6 181 aaKnown RBP20.23■□□□□ 0.83
TIMP4-201ENST00000287814 ZNF830Q96NB3 372 aaPredicted RBP20.23■□□□□ 0.83
TIMP4-201ENST00000287814 CAPN6Q9Y6Q1 641 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 SDK1Q7Z5N4 2213 aa20.23■□□□□ 0.83
TIMP4-201ENST00000287814 RNASEH1O60930 286 aaKnown RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 IL1BP01584 269 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 IGLV3-19P01714 112 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 LMNAP02545 664 aaKnown RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 DNTTP04053 509 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 PSMD8P48556 350 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 GBE1Q04446 702 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 ZBTB16Q05516 673 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 SLC10A2Q12908 348 aaPredicted RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 LLGL1Q15334 1064 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 CARD16Q5EG05 197 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 NT5DC3Q86UY8 548 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 FAM124AQ86V42 546 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 AADATQ8N5Z0 425 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 ZC3H10Q96K80 434 aaKnown RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 PABPC3Q9H361 631 aaKnown RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 KCNF1Q9H3M0 494 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 UBA2Q9UBT2 640 aaPredicted RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 GUCA1BQ9UMX6 200 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 ZNF487B1APH4 448 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 MAFKO60675 156 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 PEX11BO96011 259 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 GKP32189 559 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 CHRNA3P32297 505 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 CTNNA1P35221 906 aaKnown RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 CDKN2BP42772 138 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 BYSLQ13895 437 aaKnown RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 TAZQ16635 292 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 POM121L1PQ3SYA9 428 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 ATXN7L2Q5T6C5 722 aaPredicted RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 VSIG1Q86XK7 387 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 KATNAL2Q8IYT4 538 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 DEFB119Q8N690 84 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 PLD5Q8N7P1 536 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 OR6K2Q8NGY2 324 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 LRRN4Q8WUT4 740 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 TOE1Q96GM8 510 aaKnown RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 SPACA7Q96KW9 195 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 WSB2Q9NYS7 404 aaPredicted RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 PCDHA3Q9Y5H8 950 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 WASF2Q9Y6W5 498 aa20.22■□□□□ 0.83
TIMP4-201ENST00000287814 ZFHX2Q9C0A1 2572 aaPredicted RBP20.22■□□□□ 0.83
TIMP4-201ENST00000287814 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 A0A1W2PP55 124 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 PRR23AA6NEV1 266 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 PLK4O00444 970 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 ALOX15BO15296 676 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 CCDC175P0C221 793 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 KRT10P13645 584 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 SERPINB6P35237 376 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 PEX5P50542 639 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 CCNHP51946 323 aaPredicted RBP20.21■□□□□ 0.83
TIMP4-201ENST00000287814 IL10RBQ08334 325 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 SLC9A4Q6AI14 798 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 TMEFF1Q8IYR6 380 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 PIP4K2CQ8TBX8 421 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 CASKIN2Q8WXE0 1202 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 ANP32BQ92688 251 aaKnown RBP20.21■□□□□ 0.83
TIMP4-201ENST00000287814 SP110Q9HB58 689 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 FBXL12Q9NXK8 326 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 LHX3Q9UBR4 397 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 WDR87Q6ZQQ6 2873 aa20.21■□□□□ 0.83
TIMP4-201ENST00000287814 MAP3K13O43283 966 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 ZRANB2O95218 330 aaKnown RBP eCLIP20.2■□□□□ 0.827e-6■■■□□ 15
TIMP4-201ENST00000287814 FTCDO95954 541 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 CD6P30203 668 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 ACSL1P33121 698 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 DRD3P35462 400 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 PLA2G5P39877 138 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 RECQLP46063 649 aaPredicted RBP20.2■□□□□ 0.82
TIMP4-201ENST00000287814 ADCY2Q08462 1091 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 GALNT2Q10471 571 aa20.2■□□□□ 0.82
TIMP4-201ENST00000287814 IFI16Q16666 785 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms