RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 EXT2Q93063 718 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 ERP27Q96DN0 273 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 PCED1BQ96HM7 432 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 BRD9Q9H8M2 597 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 H2AFY2Q9P0M6 372 aaPredicted RBP7.04□□□□□ -1.28
VPS8-201ENST00000287546 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.04□□□□□ -1.28
VPS8-201ENST00000287546 PCDHB3Q9Y5E6 796 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 TBC1D3BA6NDS4 549 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 F5H423 210 aaPredicted RBP7.04□□□□□ -1.28
VPS8-201ENST00000287546 F5H5T6 163 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 GSNP06396 782 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 SCTRP47872 440 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 MPP3Q13368 585 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 PPIGQ13427 754 aaKnown RBP eCLIP7.04□□□□□ -1.282e-7■■■■□ 19.5
VPS8-201ENST00000287546 CCDC153Q494R4 210 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 SLC39A12Q504Y0 691 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 RNF43Q68DV7 783 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 CLEC20AQ6ZU45 233 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 PARP9Q8IXQ6 854 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 POMGNT2Q8NAT1 580 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 IPMKQ8NFU5 416 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 OTULINQ96BN8 352 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 KLF6Q99612 283 aaPredicted RBP7.04□□□□□ -1.28
VPS8-201ENST00000287546 NEK6Q9HC98 313 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 SEPT3Q9UH03 358 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 AK5Q9Y6K8 562 aa7.04□□□□□ -1.28
VPS8-201ENST00000287546 CEP290O15078 2479 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 H0Y626 953 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 PPEF2O14830 753 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 FYNP06241 537 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 TCF4P15884 667 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 HOXB8P17481 243 aaPredicted RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 SERPINB4P48594 390 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 GLUD2P49448 558 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 BNC1Q01954 994 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 OCRLQ01968 901 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 MLLT1Q03111 559 aaPredicted RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 ZNF252P-AS1Q0IIN9 211 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 SEMA5AQ13591 1074 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 AARS2Q5JTZ9 985 aaKnown RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 GDF6Q6KF10 455 aaPredicted RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 DUS1LQ6P1R4 473 aaKnown RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 PRUNE1Q86TP1 453 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 USP33Q8TEY7 942 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 USP13Q92995 863 aaPredicted RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 PABPC5Q96DU9 382 aaKnown RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 P2RY11Q96G91 374 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 CCT7Q99832 543 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 ASPSCR1Q9BZE9 553 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 KLHL25Q9H0H3 589 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 C10orf88Q9H8K7 445 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 FNIP2Q9P278 1114 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 LNPEPQ9UIQ6 1025 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 VPS9D1Q9Y2B5 631 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 KLHL2O95198 593 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 HMBSP08397 361 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 WEE1P30291 646 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 CSE1LP55060 971 aaKnown RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 GBE1Q04446 702 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 PRKCZQ05513 592 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 ZNF33AQ06730 810 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 FAAP100Q0VG06 881 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 MTM1Q13496 603 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 USP10Q14694 798 aaKnown RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 ZNF284Q2VY69 593 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 TMEM63BQ5T3F8 832 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 FAM171A1Q5VUB5 890 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 ZNF75CPQ92670 426 aaPredicted RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 PWWP2AQ96N64 755 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 RPRD1AQ96P16 312 aaPredicted RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 PPP1R10Q96QC0 940 aaKnown RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 OMDQ99983 421 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 TLE6Q9H808 572 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 CDHR5Q9HBB8 845 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 ARHGEF38Q9NXL2 777 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 NDE1Q9NXR1 346 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 POLR1DQ9Y2S0 133 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 DTNAQ9Y4J8 743 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 ARID2Q68CP9 1835 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 DNAJC8O75937 253 aaPredicted RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 ALOX15P16050 662 aaPredicted RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 SELPP16109 830 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 IVDP26440 423 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 MGAT1P26572 445 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 RFX3P48380 749 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 TUBP50607 506 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 SESN3P58005 492 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 TRIM32Q13049 653 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 UBXN2BQ14CS0 331 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 RAB30Q15771 203 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 DNAL1Q4LDG9 190 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 ZNF544Q6NX49 715 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 ECHDC2Q86YB7 292 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 HOMEZQ8IX15 550 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 SIX5Q8N196 739 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 ZNF557Q8N988 423 aaPredicted RBP7.03□□□□□ -1.28
VPS8-201ENST00000287546 PPP1R13LQ8WUF5 828 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 CCDC126Q96EE4 140 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 SUSD3Q96L08 255 aa7.03□□□□□ -1.28
VPS8-201ENST00000287546 RMDN2Q96LZ7 410 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms