RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NT5C1B-RDH14C9J2C7 533 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 PQBP1O60828 265 aaKnown RBP18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 SIN3BO75182 1162 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 GLRA3O75311 464 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 FGF3P11487 239 aaPredicted RBP18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 ATN1P54259 1190 aaPredicted RBP18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 SFT2D3Q587I9 215 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 ZNF534Q76KX8 674 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 ARHGAP22Q7Z5H3 698 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 FAM126BQ8IXS8 530 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 TTC9BQ8N6N2 239 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 NPWQ8N729 165 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 URGCPQ8TCY9 931 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 GPR152Q8TDT2 470 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 SLC26A7Q8TE54 656 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 DQX1Q8TE96 717 aaKnown RBP18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 WDCPQ9H6R7 721 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 SFMBT1Q9UHJ3 866 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 PDLIM1O00151 329 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 KCNK1O00180 336 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 ENPP3O14638 875 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 MSI1O43347 362 aaKnown RBP18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 DDR2Q16832 855 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 RNF111Q6ZNA4 994 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 CMTM5Q96DZ9 223 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 P2RY11Q96G91 374 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 FAM193BQ96PV7 902 aaPredicted RBP18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 MOCS1Q9NZB8 636 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 CDH22Q9UJ99 828 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 NUP205Q92621 2012 aa18.64■□□□□ 0.57
PDLIM3-201ENST00000284767 DCLK1O15075 740 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 PEX1O43933 1283 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 OPHN1O60890 802 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 GCATO75600 419 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 TYMPP19971 482 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 MSLNQ13421 630 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 RALGPS1Q5JS13 557 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 PSTKQ8IV42 348 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 MPP5Q8N3R9 675 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 PPP4R1Q8TF05 950 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 GDPD5Q8WTR4 605 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 DEFB118Q96PH6 123 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 EPAS1Q99814 870 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 RCOR3Q9P2K3 495 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 ADAMTS6Q9UKP5 1117 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 ITM2AO43736 263 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 TADA2AO75478 443 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 SOAT2O75908 522 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 SERPINE1P05121 402 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 ALOX15P16050 662 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 VCLP18206 1134 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 GRK2P25098 689 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 TPI1P60174 286 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 SEMA3BQ13214 749 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 LSAMPQ13449 338 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 DRAXINQ8NBI3 349 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 ATP2A3Q93084 1043 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 RNF34Q969K3 372 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 GPR62Q9BZJ7 368 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 NMUR1Q9HB89 426 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 NDUFA13Q9P0J0 144 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 EMCNQ9ULC0 261 aa18.63■□□□□ 0.57
PDLIM3-201ENST00000284767 SMIM31A0A1B0GVY4 71 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 TNFRSF10BO14763 440 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 CASQ2O14958 399 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 LYPLA1O75608 230 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 GNRH1P01148 92 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 ARPP19P56211 112 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 LPCAT4Q643R3 524 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 POU5F2Q8N7G0 328 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 SHKBP1Q8TBC3 707 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 NTAN1Q96AB6 310 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 BTBD9Q96Q07 612 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 NDNQ99608 321 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 SIK2Q9H0K1 926 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 EPB41L1Q9H4G0 881 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 TMEM161AQ9NX61 479 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 OR12D3Q9UGF7 316 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 DCDC2Q9UHG0 476 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 SF3B1O75533 1304 aaKnown RBP eCLIP18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 VWA8A3KMH1 1905 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 RNF103O00237 685 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 AP1G1O43747 822 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 EPHB1P54762 984 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 AQP4P55087 323 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 RPL10AP62906 217 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 OLIG2Q13516 323 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 VARS2Q5ST30 1063 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 N4BP2L1Q5TBK1 243 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 STEAP4Q687X5 459 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 PGAP3Q96FM1 320 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 SLC9A7Q96T83 725 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 SCN5AQ14524 2016 aa18.62■□□□□ 0.57
PDLIM3-201ENST00000284767 PLIN3O60664 434 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 CAPN15O75808 1086 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 ALDH1A2O94788 518 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 LRIG2O94898 1065 aa18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 TOP3BO95985 862 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-201ENST00000284767 PROCP04070 461 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms