RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 A0A096LPK6 155 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 CCNE2O96020 404 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 NR3C2P08235 984 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
HERC6-202ENST00000273960 CYP2C9P11712 490 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 GRIA4P48058 902 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 PLK1P53350 603 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 NOMO1Q15155 1222 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 TIGD2Q4W5G0 525 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 TBCELQ5QJ74 424 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 TREML2Q5T2D2 321 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 NIPAL1Q6NVV3 410 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 STRA8Q7Z7C7 330 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 SPPL2CQ8IUH8 684 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 ELMO1Q92556 727 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
HERC6-202ENST00000273960 PRORSD1PA6NEY8 169 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 M0QYV0 167 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 DDNO94850 711 aaPredicted RBP13.02□□□□□ -0.32
HERC6-202ENST00000273960 TRUB2O95900 331 aaKnown RBP13.02□□□□□ -0.32
HERC6-202ENST00000273960 TFEBP19484 476 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 ACAT1P24752 427 aaKnown RBP13.02□□□□□ -0.32
HERC6-202ENST00000273960 ELK4P28324 431 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 OPRL1P41146 370 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 CASP2P42575 452 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 MOB2Q70IA6 237 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 VASH1Q7L8A9 365 aaPredicted RBP13.02□□□□□ -0.32
HERC6-202ENST00000273960 ZNF280CQ8ND82 737 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 CENPOQ9BU64 300 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 INO80BQ9C086 356 aaPredicted RBP13.02□□□□□ -0.32
HERC6-202ENST00000273960 SNX25Q9H3E2 840 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 DCDC2Q9UHG0 476 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 PRPF19Q9UMS4 504 aaKnown RBP13.02□□□□□ -0.32
HERC6-202ENST00000273960 CDYLQ9Y232 598 aa13.02□□□□□ -0.32
HERC6-202ENST00000273960 COPG1Q9Y678 874 aaKnown RBP13.02□□□□□ -0.32
HERC6-202ENST00000273960 FAM159BA6NKW6 160 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 XYLBO75191 536 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 IDO1P14902 403 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 TPH1P17752 444 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 CCNA2P20248 432 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 GARTP22102 1010 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 SERPINB9P50453 376 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 TAS1R3Q7RTX0 852 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 PGAM4Q8N0Y7 254 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 PNPLA1Q8N8W4 532 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 ZNF669Q96BR6 464 aaPredicted RBP13.02□□□□□ -0.33
HERC6-202ENST00000273960 LGMNQ99538 433 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 RSAD1Q9HA92 442 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 ZNHIT2Q9UHR6 403 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 TLL2Q9Y6L7 1015 aa13.02□□□□□ -0.33
HERC6-202ENST00000273960 K7ERI5 159 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 TRDMT1O14717 391 aaKnown RBP13.01□□□□□ -0.33
HERC6-202ENST00000273960 APOL1O14791 398 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 EXTL3O43909 919 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 PRKCGP05129 697 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 SLC7A2P52569 658 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 ADI1Q9BV57 179 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 VPS45Q9NRW7 570 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 KLQ9UEF7 1012 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 BRWD3Q6RI45 1802 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 TRIM13O60858 407 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 RPL26P61254 145 aaKnown RBP13.01□□□□□ -0.33
HERC6-202ENST00000273960 NFATC3Q12968 1075 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 PPP1R3AQ16821 1122 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 FAM35AQ86V20 835 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 ACDQ96AP0 544 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 ZNF597Q96LX8 424 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 CCDC138Q96M89 665 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 GBA3Q9H227 469 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
HERC6-202ENST00000273960 DUS2Q9NX74 493 aaKnown RBP13.01□□□□□ -0.33
HERC6-202ENST00000273960 SYBUQ9NX95 663 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 HMGXB4Q9UGU5 601 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 PCDHB12Q9Y5F1 795 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 PCDHA11Q9Y5I1 949 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 NEMP2A6NFY4 417 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 TRIM38O00635 465 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 ACOT8O14734 319 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 DHX15O43143 795 aaKnown RBP13.01□□□□□ -0.33
HERC6-202ENST00000273960 PAPSS1O43252 624 aaPredicted RBP13.01□□□□□ -0.33
HERC6-202ENST00000273960 POLR2BP30876 1174 aaKnown RBP13.01□□□□□ -0.33
HERC6-202ENST00000273960 IDUAP35475 653 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 GSSP48637 474 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 TXNL4AP83876 142 aaKnown RBP13.01□□□□□ -0.33
HERC6-202ENST00000273960 CNTN2Q02246 1040 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 IMPG1Q17R60 797 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 DNAAF3Q8N9W5 541 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 RP9Q8TA86 221 aaKnown RBP13.01□□□□□ -0.33
HERC6-202ENST00000273960 SLCO4A1Q96BD0 722 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 SEPHS2Q99611 448 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 BEGAINQ9BUH8 593 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 LTB4R2Q9NPC1 389 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 UBP1Q9NZI7 540 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 CROTQ9UKG9 612 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 OAZ3Q9UMX2 235 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 SQORQ9Y6N5 450 aa13.01□□□□□ -0.33
HERC6-202ENST00000273960 GPC4O75487 556 aa13□□□□□ -0.33
HERC6-202ENST00000273960 CES1P23141 567 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms