RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 ADGRG1Q9Y653 693 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 TET3O43151 1660 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 SCUBE1Q8IWY4 988 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 MB21D2Q8IYB1 491 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 SPERTQ8NA61 448 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 TMEM79Q9BSE2 394 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 EPB41L4AQ9HCS5 686 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 MRPL17Q9NRX2 175 aaKnown RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 FGF10O15520 208 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 SRP54P61011 504 aaKnown RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 RPS6P62753 249 aaKnown RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 LRRC46Q96FV0 321 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 MS4A14Q96JA4 679 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ASAH2Q9NR71 780 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ZNF624Q9P2J8 865 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-201ENST00000270722 BICRAQ9NZM4 1560 aa13.43□□□□□ -0.26
PRDM16-201ENST00000270722 ABRQ12979 859 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 CBFBQ13951 182 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 KCNT1Q5JUK3 1230 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 UBXN11Q5T124 520 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 GPR135Q8IZ08 494 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 TEX47Q8TBZ9 253 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 CDH19Q9H159 772 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 PHF11Q9UIL8 331 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 A0A0G2JLW4 131 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 CYP11B1P15538 503 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 ITGA2P17301 1181 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 OR1E1P30953 314 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 MPP3Q13368 585 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 MSLNQ13421 630 aaPredicted RBP13.42□□□□□ -0.26
PRDM16-201ENST00000270722 HLFQ16534 295 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 FAM187BQ17R55 369 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 HNRNPLLQ8WVV9 542 aaKnown RBP13.42□□□□□ -0.26
PRDM16-201ENST00000270722 UROC1Q96N76 676 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 WHRNQ9P202 907 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 CCDC88CQ9P219 2028 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 UGT1A5P35504 534 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 SMU1Q2TAY7 513 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 FAM182BQ5T319 152 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 CACTIN-AS1Q8N1I8 211 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 MAFIPQ8WZ33 124 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 VANGL2Q9ULK5 521 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 DGKAP23743 735 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 RPL21P46778 160 aaKnown RBP13.42□□□□□ -0.26
PRDM16-201ENST00000270722 RGS6P49758 472 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 ITGA8P53708 1063 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 ARMC12Q5T9G4 340 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 BNC2Q6ZN30 1099 aaPredicted RBP13.42□□□□□ -0.26
PRDM16-201ENST00000270722 ATXN3LQ9H3M9 355 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 ASB7Q9H672 318 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 HCN3Q9P1Z3 774 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 FAM196BA6NMK8 535 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 RGS14O43566 566 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 PDHA2P29803 388 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 CHI3L2Q15782 390 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 SLC38A2Q96QD8 506 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 ISCA1Q9BUE6 129 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 TARS2Q9BW92 718 aaKnown RBP13.42□□□□□ -0.26
PRDM16-201ENST00000270722 RXFP1Q9HBX9 757 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 KCTD5Q9NXV2 234 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 H0YJX3 145 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 OR6B1O95007 311 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 TARSP26639 723 aaKnown RBP13.42□□□□□ -0.26
PRDM16-201ENST00000270722 ACAP1Q15027 740 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 RHEBQ15382 184 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 NFIL3Q16649 462 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 HSD17B12Q53GQ0 312 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 XKRXQ6PP77 449 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 MARK2Q7KZI7 788 aaKnown RBP13.42□□□□□ -0.26
PRDM16-201ENST00000270722 GJD3Q8N144 294 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 OR8H3Q8N146 312 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 MARK1Q9P0L2 795 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 OR10H2O60403 315 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 HLA-DQA2P01906 255 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 IGFBP4P22692 258 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 SYCE2Q6PIF2 218 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 METTL7BQ6UX53 244 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
PRDM16-201ENST00000270722 SLC30A5Q8TAD4 765 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 CXorf40AQ8TE69 158 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 HPS4Q9NQG7 708 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 OR10H1Q9Y4A9 318 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 TAF6LQ9Y6J9 622 aa13.42□□□□□ -0.26
PRDM16-201ENST00000270722 H3BN98 237 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 CCNKO75909 580 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ATP1A3P13637 1013 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 TBC1D10CQ8IV04 446 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 HERC2P3Q9BVR0 1158 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 GSDMCQ9BYG8 508 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 PNPLA6Q8IY17 1366 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 GSG1L2A8MUP6 293 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 AP3D1O14617 1153 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 PQBP1O60828 265 aaKnown RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 ADH1CP00326 375 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 TSGA10IPQ3SY00 556 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 R3HCC1LQ7Z5L2 792 aaKnown RBP13.41□□□□□ -0.26
PRDM16-201ENST00000270722 FAM83AQ86UY5 434 aa13.41□□□□□ -0.26
PRDM16-201ENST00000270722 FAM71DQ8N9W8 422 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms