RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 LTBP3Q9NS15 1303 aa20.13■□□□□ 0.81
CSPG5-201ENST00000264723 C9JVG2 144 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 NCAM2O15394 837 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 RFPL1O75677 317 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 RHOBTB1O94844 696 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 YWHAQP27348 245 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 SLC11A2P49281 568 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 MAP3K10Q02779 954 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 FSTL4Q6MZW2 842 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 CYGBQ8WWM9 190 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 CINPQ9BW66 212 aaPredicted RBP20.12■□□□□ 0.81
CSPG5-201ENST00000264723 SSU72Q9NP77 194 aaKnown RBP20.12■□□□□ 0.81
CSPG5-201ENST00000264723 SUPT3HB4E1H0 165 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 RAMP2O60895 175 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 MT-CYBP00156 380 aaPredicted RBP20.12■□□□□ 0.81
CSPG5-201ENST00000264723 HADHAP40939 763 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 ABL2P42684 1182 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 KRT72Q14CN4 511 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 SPANXN3Q5MJ09 141 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 RHOBTB2Q9BYZ6 727 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 SAC3D1A6NKF1 404 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 STX7O15400 261 aaKnown RBP20.12■□□□□ 0.81
CSPG5-201ENST00000264723 LYNP07948 512 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 CCDC153Q494R4 210 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 FBXO48Q5FWF7 155 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 RAP1GAP2Q684P5 730 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 LDB1Q86U70 411 aaPredicted RBP20.12■□□□□ 0.81
CSPG5-201ENST00000264723 CALML6Q8TD86 181 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 SIGLEC10Q96LC7 697 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 PANX3Q96QZ0 392 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 CITO14578 2027 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 ANGPT2O15123 496 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 RAB27AP51159 221 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 CLDN10P78369 228 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 KLF10Q13118 480 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 CDH18Q13634 790 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 RBBP7Q16576 425 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 ARRDC4Q8NCT1 418 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 PCED1BQ96HM7 432 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 MARCH2Q9P0N8 246 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 CDH9Q9ULB4 789 aa20.12■□□□□ 0.81
CSPG5-201ENST00000264723 YJEFN3A6XGL0 299 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 IDH3AP50213 366 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 RPL14P50914 215 aaKnown RBP20.11■□□□□ 0.81
CSPG5-201ENST00000264723 HFE2Q6ZVN8 426 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 ZBTB46Q86UZ6 589 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 SNRNP27Q8WVK2 155 aaKnown RBP20.11■□□□□ 0.81
CSPG5-201ENST00000264723 WDR41Q9HAD4 459 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 NCKIPSDQ9NZQ3 722 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 C10orf71Q711Q0 1435 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 GON4LQ3T8J9 2241 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 ERI2A8K979 691 aaKnown RBP20.11■□□□□ 0.81
CSPG5-201ENST00000264723 PPARGP37231 505 aaPredicted RBP20.11■□□□□ 0.81
CSPG5-201ENST00000264723 CDH13P55290 713 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 SGO1Q5FBB7 561 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 OLFML1Q6UWY5 402 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 AMIGO2Q86SJ2 522 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 TUBGCP3Q96CW5 907 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 LTBP4Q8N2S1 1624 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 SORBS2O94875 1100 aaKnown RBP20.11■□□□□ 0.81
CSPG5-201ENST00000264723 COL1A2P08123 1366 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 SLC18A2Q05940 514 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 KCNA10Q16322 511 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 ARL13AQ5H913 290 aaPredicted RBP20.11■□□□□ 0.81
CSPG5-201ENST00000264723 TLDC1Q6P9B6 456 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 EXOC2Q96KP1 924 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 GATA5Q9BWX5 397 aaPredicted RBP20.11■□□□□ 0.81
CSPG5-201ENST00000264723 BCO2Q9BYV7 579 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 POMKQ9H5K3 350 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 ATP11BQ9Y2G3 1177 aa20.11■□□□□ 0.81
CSPG5-201ENST00000264723 NR5A2O00482 541 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 BIRC5O15392 142 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 MBL2P11226 248 aaPredicted RBP20.1■□□□□ 0.81
CSPG5-201ENST00000264723 GRM3Q14832 879 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 PPM1LQ5SGD2 360 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 SLC26A9Q7LBE3 791 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 ELMOD1Q8N336 334 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 CARNMT1Q8N4J0 409 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 SEPT8Q92599 483 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 ZMAT2Q96NC0 199 aaKnown RBP20.1■□□□□ 0.81
CSPG5-201ENST00000264723 KLHL5Q96PQ7 755 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 S100A14Q9HCY8 104 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 LNPEPQ9UIQ6 1025 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 TRIM17Q9Y577 477 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 FAM95CA0A1B0GW59 222 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 SNUPNO95149 360 aaKnown RBP20.1■□□□□ 0.81
CSPG5-201ENST00000264723 SP3Q02447 781 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 PDK3Q15120 406 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 CNDP1Q96KN2 507 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 FCRL2Q96LA5 508 aaPredicted RBP20.1■□□□□ 0.81
CSPG5-201ENST00000264723 APOL5Q9BWW9 433 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 IRAK4Q9NWZ3 460 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 RHBDL2Q9NX52 303 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 MORF4L1Q9UBU8 362 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 RGS17Q9UGC6 210 aaPredicted RBP20.1■□□□□ 0.81
CSPG5-201ENST00000264723 CDH22Q9UJ99 828 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 NEMP2A6NFY4 417 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 PIK3R1P27986 724 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 AQP4P55087 323 aa20.1■□□□□ 0.81
CSPG5-201ENST00000264723 SATB1Q01826 763 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms