RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 WFDC5Q8TCV5 224 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 DDI1Q8WTU0 396 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 MUC3BQ9H195 1237 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 PRO3102Q9H379 93 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 UBP1Q9NZI7 540 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 OR51B4Q9Y5P0 310 aa23.29■■□□□ 1.32
SMARCB1-201ENST00000263121 GLDCP23378 1020 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 SSTR1P30872 391 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 GEMP55040 296 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 CDH18Q13634 790 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 CBX2Q14781 532 aaPredicted RBP23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 RARS2Q5T160 578 aaKnown RBP23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 LEKR1Q6ZMV7 388 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 MPP5Q8N3R9 675 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 PGBD5Q8N414 524 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 IMP4Q96G21 291 aaKnown RBP23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 USP12O75317 370 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 MT-CYBP00156 380 aaPredicted RBP23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 MZF1P28698 734 aaPredicted RBP23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 PHBP35232 272 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 NUMBP49757 651 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 TCEAL5Q5H9L2 206 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 FYB2Q5VWT5 728 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 CAPN12Q6ZSI9 719 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 TPGS1Q6ZTW0 290 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 C3orf62Q6ZUJ4 267 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 MFN1Q8IWA4 741 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 EFHBQ8N7U6 833 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 OR52K1Q8NGK4 314 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 EPS8L3Q8TE67 593 aaKnown RBP23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 ALG14Q96F25 216 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 EBNA1BP2Q99848 306 aaKnown RBP23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 FEM1AQ9BSK4 669 aa23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 UBA2Q9UBT2 640 aaPredicted RBP23.28■■□□□ 1.32
SMARCB1-201ENST00000263121 SDR42E2A6NKP2 422 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 RASGRF2O14827 1237 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 SPAG6O75602 509 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 CPP00450 1065 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 NIPAL4Q0D2K0 466 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 RFTN1Q14699 578 aaPredicted RBP23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 NAPEPLDQ6IQ20 393 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 GPR149Q86SP6 731 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 PRPF39Q86UA1 669 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 BHMTQ93088 406 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 TADA1Q96BN2 335 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 ATP6V1G3Q96LB4 118 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 KIF9Q9HAQ2 790 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 PLAC1Q9HBJ0 212 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 TBC1D14Q9P2M4 693 aa23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 ZC3H7BQ9UGR2 993 aaKnown RBP23.27■■□□□ 1.32
SMARCB1-201ENST00000263121 LINC01565O15544 149 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 ZMPSTE24O75844 475 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 CYBBP04839 570 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 MGAT1P26572 445 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 ADRA1AP35348 466 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 CSKP41240 450 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 MAXP61244 160 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 ARF5P84085 180 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 MPP3Q13368 585 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 LONRF1Q17RB8 773 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 AGBL2Q5U5Z8 902 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 ALG1LQ6GMV1 187 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 LINC00523Q86TU6 105 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 ARRDC2Q8TBH0 407 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 CCDC77Q9BR77 488 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 PIH1D1Q9NWS0 290 aaKnown RBP23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 RABGEF1Q9UJ41 708 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 ACTL7AQ9Y615 435 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 CDH23Q9H251 3354 aa23.26■■□□□ 1.31
SMARCB1-201ENST00000263121 CBX4O00257 560 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 MUSKO15146 869 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 IVLP07476 585 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 MMP2P08253 660 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 FSHRP23945 695 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 SESN2P58004 480 aaPredicted RBP23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 DSC2Q02487 901 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 ZNF235Q14590 738 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 ANKRD54Q6NXT1 300 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 KDELC1Q6UW63 502 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 NPAS3Q8IXF0 933 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 CELF5Q8N6W0 485 aaKnown RBP23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 FIBINQ8TAL6 211 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 PGM2Q96G03 612 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 TBL1YQ9BQ87 522 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 POLR1EQ9GZS1 481 aaKnown RBP23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 VPS45Q9NRW7 570 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 PLK2Q9NYY3 685 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 SEPT3Q9UH03 358 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 CLEC4EQ9ULY5 219 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 MAD1L1Q9Y6D9 718 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 AP3B1O00203 1094 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 PENKP01210 267 aaPredicted RBP23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 GSTA2P09210 222 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 ITKQ08881 620 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 SYCE2Q6PIF2 218 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 BBS5Q8N3I7 341 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 KIAA1958Q8N8K9 716 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 DCAF4L2Q8NA75 395 aa23.25■■□□□ 1.31
SMARCB1-201ENST00000263121 IPMKQ8NFU5 416 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms