RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SMCO1Q147U7 214 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 OVOS1Q6IE37 1185 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 FBXO39Q8N4B4 442 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 LPCAT1Q8NF37 534 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 MYLPFQ96A32 169 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 ZNF558Q96NG5 402 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 FRMD8P1Q9BZ68 369 aaPredicted RBP13.02□□□□□ -0.32
TTC39A-202ENST00000262676 RACGAP1Q9H0H5 632 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 TNKS2Q9H2K2 1166 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 AGO4Q9HCK5 861 aaKnown RBP13.02□□□□□ -0.32
TTC39A-202ENST00000262676 CLN6Q9NWW5 311 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 NUDT5Q9UKK9 219 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 ASTN2O75129 1339 aaPredicted RBP13.02□□□□□ -0.32
TTC39A-202ENST00000262676 STX16-NPEPL1H3BU86 382 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 WWP2O00308 870 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 STX16O14662 325 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 RBMXL2O75526 392 aaKnown RBP13.02□□□□□ -0.32
TTC39A-202ENST00000262676 GPR15P49685 360 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 ZNF846Q147U1 533 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 DENND5AQ6IQ26 1287 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 FAM171BQ6P995 826 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 FAM50BQ9Y247 325 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 PCDHB9Q9Y5E1 797 aa13.02□□□□□ -0.32
TTC39A-202ENST00000262676 ITSN1Q15811 1721 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
TTC39A-202ENST00000262676 USP46P62068 366 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 MTAPQ13126 283 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 TIMM50Q3ZCQ8 353 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 INO80DQ53TQ3 878 aaPredicted RBP13.02□□□□□ -0.33
TTC39A-202ENST00000262676 FNBP1LQ5T0N5 605 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 ZFP1Q6P2D0 407 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 MILR1Q7Z6M3 343 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 SAMD3Q8N6K7 520 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 SCAIQ8N9R8 606 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 TCP10LQ8TDR4 215 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 FAR1Q8WVX9 515 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 ZNF184Q99676 751 aaPredicted RBP13.02□□□□□ -0.33
TTC39A-202ENST00000262676 FAM192AQ9GZU8 254 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 ANKEF1Q9NU02 776 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 DKK3Q9UBP4 350 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 FAM198AQ9UFP1 575 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 CBX4O00257 560 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 DCXO43602 365 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 JCHAINP01591 159 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 PROCP04070 461 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 HIST1H2ABP04908 130 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 CHRNGP07510 517 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 CCDC166P0CW27 439 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 NPR3P17342 541 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 HPCAL1P37235 193 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 GRSF1Q12849 480 aaKnown RBP eCLIP13.02□□□□□ -0.33
TTC39A-202ENST00000262676 FNDC3BQ53EP0 1204 aaKnown RBP13.02□□□□□ -0.33
TTC39A-202ENST00000262676 IRGCQ6NXR0 463 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 HIST3H2AQ7L7L0 130 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 PCDH20Q8N6Y1 951 aaKnown RBP13.02□□□□□ -0.33
TTC39A-202ENST00000262676 GMCL1P1Q8NEA9 526 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 LPPQ93052 612 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 HIST1H2ACQ93077 130 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 DDX43Q9NXZ2 648 aaKnown RBP13.02□□□□□ -0.33
TTC39A-202ENST00000262676 LRRIQ1Q96JM4 1722 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 DLC1Q96QB1 1528 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 HAT1O14929 419 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 POM121L1PQ3SYA9 428 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 SPOCD1Q6ZMY3 1216 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 HELQQ8TDG4 1101 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 STK32AQ8WU08 396 aa13.02□□□□□ -0.33
TTC39A-202ENST00000262676 REXO5Q96IC2 774 aaKnown RBP13.02□□□□□ -0.33
TTC39A-202ENST00000262676 A0A0X1KG70 313 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 ZBTB11O95625 1053 aaPredicted RBP13.01□□□□□ -0.33
TTC39A-202ENST00000262676 PRKAR1AP10644 381 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 SLC2A3P11169 496 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 LRPAP1P30533 357 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 ANTXR2P58335 489 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 MSLNQ13421 630 aaPredicted RBP13.01□□□□□ -0.33
TTC39A-202ENST00000262676 BOP1Q14137 746 aaKnown RBP13.01□□□□□ -0.33
TTC39A-202ENST00000262676 PDK2Q15119 407 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 SWI5Q1ZZU3 235 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 CES3Q6UWW8 571 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 ZNF540Q8NDQ6 660 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 POP1Q99575 1024 aaKnown RBP13.01□□□□□ -0.33
TTC39A-202ENST00000262676 ADGRE3Q9BY15 652 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 GANQ9H2C0 597 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 C12orf4Q9NQ89 552 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 ZNF224Q9NZL3 707 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 PFDN2Q9UHV9 154 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 CLEC4AQ9UMR7 237 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 USP18Q9UMW8 372 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 MRPS23Q9Y3D9 190 aaKnown RBP13.01□□□□□ -0.33
TTC39A-202ENST00000262676 EPN2O95208 641 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 KCNH1O95259 989 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 BMP10O95393 424 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 RHOCP08134 193 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 TOP3AQ13472 1001 aaPredicted RBP13.01□□□□□ -0.33
TTC39A-202ENST00000262676 CATSPERGQ6ZRH7 1159 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 AKAP14Q86UN6 197 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 CYP2W1Q8TAV3 490 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 LENG1Q96BZ8 264 aaPredicted RBP13.01□□□□□ -0.33
TTC39A-202ENST00000262676 IKZF3Q9UKT9 509 aa13.01□□□□□ -0.33
TTC39A-202ENST00000262676 PMF1-BGLAPU3KQ54 211 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms